Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2319 ATGGAGATGAGATGCAAGGAAGACATAGAGATAGGCACAGACATGACACCACCGCTCACCCCACTCTCTTTCTCTCTCCACAACGCCAATCTCCACACTCACTGCTCCTCATGTTTCTCTCTCATCACAACTCCCATTCCCAATCCCATTCCTCCCTTCTACTGCTCTCCTCACTGCACCACCGCCCATTCCTCCATCCACCTCTCCTCCGCCGAACACCACCTACCTTCCTCCTCCACCTCCTCCCTCCTCCGCACCGCCCTCCGCCTCCTCCTCAGCTCCCACCGCACTCCCCCCTCCACCCGCCTCAACCATTTACTCACTAACCGTCGTCTGCTCACGTCTCACAACGATGAACTCTCCGAAACTATCCGTATCAACGCTCTTGCAATGGCCACCGCAATAGCAAAGCAAAGAAGCGGCGGCGACGGCGGATTTATTGAATCATACGACGACGCTGTTTTGGAGGAAGCTACTGATGCTCTCTGCGCGGTGCTAACGAACGCGGTGGAGGTGCACAATAACGAAGGACGCGCGTTAGGCATTGCGGTTTTTGAGCCTGCTTTCTCTTGGATTAATCACAGTTGTTCCCCCAATGCATGCTACCGTTTCTCTTTCGATTCTTCTTCTTTGATTTCTCAGATGGAATCAAAACTTCGCATAGCTCCCTTCACTCATGATTCTCAACAACCAAAAATAAATTGTGGGATTTTTGGTAGCAGTGGTGAATTTGCACAAGGGAAGAAGATTTGTGGTCCGAGATTGATTGTGAGAAGTATCAAGAGAATTAAAAAGGGGGAAGATGTTACTGTAGCATATACTGACCTCTTGCAGCCGAAGGCATTGAGACAATCAGAACTATGGTCAAAGTATCGGTTTATTTGTTGCTGTAAACGATGTAGTTCTCTGCCCTTCACATGTGTGGATCATTCATTGCAAGAAATATCTGTTTTCTGTCGAGATTCACCTGGTCTGCGTTCCGATTACAAGCTCTTCAGAGACACGGCAGATAGAAGATTGACTGATTCCATTGAAGATATTATTTCAGAGTACCTTTCCGTCGGTGATTCTGCGTCTTGTTGTGAGATGCTTGAGAAGATTCTTATTCAAGGTCTGGACGAGCAGCTAGAAACAAATGAAAGAAAATCACATTCTAAATTCACATTGCATCCCCTTCATCACCTCTCTCTAGATTCCTATACAACACTAACTTCAGCATATAAAGTCCGTGCTAGTGACTTATTGTCTGACAATTCTGAAATAAATCTTAACCAAACAGAAGCTTTTAATATGAGCAGAACTAGTGTTGCATATTCTTTGTTACTGGCAGGCGGAGTTCACCATCTCTTCAATTCTGAATCATCACTTATTGCATCAGTTGCTAATTTTTGGATAGGAGCTGGTGAATCTTTGTTAACTCTTACCACAAGTTCAGGATGGAGTAGGTTTGTTAATTTTGACACAAAATTTGAATGCTCTAACTGTTCATTAATTAATAGATTTAGAGTCTGTATGTTAAATGGTCAAATCAAAAGTGAAGATTTTGAGGTTGTATCAAATGAGTTTATTCATTGCGTCTCAGAGAATACTCATGAAGTTTGGAGTTTCCTTGTGCATGGTTGCGATTTTCTGAAATCATGTAAAGACCCTATTAATTTCAGCTGGCTAATGTCTACCAAAAATTCAGTGGATGTTGCGGCTCATGATATTGAAAATGACACACACGAGTCTGGTGATCGCGATGAACAAGCTTACAATGATCAGACAGTAGAATATATTTTTCAGCTTGGTGGACACTGCTTAACATATGGAGGATTATTGGCTTGTATATGTTATGGTCCCAATTCCCATTTGGTTTCTCATGTACAAAATATTCTAGATCATGAAAATTATATATTATTTTCACCTAATGTTTGA 1917 0.4272 MEMRCKEDIEIGTDMTPPLTPLSFSLHNANLHTHCSSCFSLITTPIPNPIPPFYCSPHCTTAHSSIHLSSAEHHLPSSSTSSLLRTALRLLLSSHRTPPSTRLNHLLTNRRLLTSHNDELSETIRINALAMATAIAKQRSGGDGGFIESYDDAVLEEATDALCAVLTNAVEVHNNEGRALGIAVFEPAFSWINHSCSPNACYRFSFDSSSLISQMESKLRIAPFTHDSQQPKINCGIFGSSGEFAQGKKICGPRLIVRSIKRIKKGEDVTVAYTDLLQPKALRQSELWSKYRFICCCKRCSSLPFTCVDHSLQEISVFCRDSPGLRSDYKLFRDTADRRLTDSIEDIISEYLSVGDSASCCEMLEKILIQGLDEQLETNERKSHSKFTLHPLHHLSLDSYTTLTSAYKVRASDLLSDNSEINLNQTEAFNMSRTSVAYSLLLAGGVHHLFNSESSLIASVANFWIGAGESLLTLTTSSGWSRFVNFDTKFECSNCSLINRFRVCMLNGQIKSEDFEVVSNEFIHCVSENTHEVWSFLVHGCDFLKSCKDPINFSWLMSTKNSVDVAAHDIENDTHESGDRDEQAYNDQTVEYIFQLGGHCLTYGGLLACICYGPNSHLVSHVQNILDHENYILFSPNV* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2319 638 SUPERFAMILY SET domain 164 302 IPR046341 -
Psa1g2319 638 PANTHER PROTEIN SET DOMAIN GROUP 41 1 630 - -
Psa1g2319 638 CDD SET_SMYD 152 300 - -
Psa1g2319 638 Pfam SET domain 3 273 IPR001214 GO:0005515
Psa1g2319 638 Gene3D - 34 78 - -
Psa1g2319 638 Gene3D SET domain 252 300 IPR046341 -
Psa1g2319 638 Gene3D SET domain 20 206 IPR046341 -
Psa1g2319 638 Gene3D - 79 169 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Psa1g2319 SET 1.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2319 - - aprc:113867790 729.939