Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2276 ATGGCTGCCAAGGGACTTGCTGGTAATGTTGAACCTTGCTTTATTGTCCCTATTGTTGTTGCAATTAATAAGTCGCTTCTGAATCAATCAAGGGGTTCTTCCAAGGGAAATTGGATTGCACAGCATAATGTTAGTGTTATGGTTGATCTTGATTTTTTCATTGGAGATGATGCACTTTCTAAGGCTTGGTCTAGTAGCACTTATAATCTCACCTACCCGATTAAGCATGGTCAGGTCGAGAATTGGGACGCCATGGAACTACACATGTTGTACCAATTGCGGATGCGGGATGCTAACATACTCAAGGAAGTGATGTTAGTCATCAAGTATTGTCACGACATGGGAGTCGTGCACAGAGATATCAAACCTGAAAATATTCTGCTCACCAAATCAGGAAAGTTAAAGCCTACGGATTTTGGACTCGCCATGAGAATTTTGGAAGGTCAAAACTTGACTGGATTGGCTGGAAGCCCTGCATATGTTGCCCCTGAAGTATTGCCGGGAAAATACTCTGAGAAGGTTGATATTTGGAGTGCTGGAGTGCTCCTGTGTGCTCTGTTGATTGGCTGCCTTCCATTTCAGGGAGATTCATTGGAAGCCGTTTTTGAGGCTAATAAGACTGTCAAATTAGATTTCCAAACAAGGATATGGGAATCAATATCTAAACCTGCATAA 675 0.4237 MAAKGLAGNVEPCFIVPIVVAINKSLLNQSRGSSKGNWIAQHNVSVMVDLDFFIGDDALSKAWSSSTYNLTYPIKHGQVENWDAMELHMLYQLRMRDANILKEVMLVIKYCHDMGVVHRDIKPENILLTKSGKLKPTDFGLAMRILEGQNLTGLAGSPAYVAPEVLPGKYSEKVDIWSAGVLLCALLIGCLPFQGDSLEAVFEANKTVKLDFQTRIWESISKPA* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2276 224 PANTHER SERINE/THREONINE-PROTEIN KINASE 95 224 - -
Psa1g2276 224 Gene3D Transferase(Phosphotransferase) domain 1 99 224 - -
Psa1g2276 224 SMART serkin_6 14 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g2276 224 SUPERFAMILY Protein kinase-like (PK-like) 99 219 IPR011009 -
Psa1g2276 224 SUPERFAMILY Actin-like ATPase domain 5 91 IPR043129 -
Psa1g2276 224 PANTHER SERINE/THREONINE-PROTEIN KINASE PEPKR2-LIKE ISOFORM X1 95 224 - -
Psa1g2276 224 Pfam Protein kinase domain 98 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g2276 224 ProSitePatterns Serine/Threonine protein kinases active-site signature. 116 128 IPR008271 GO:0004672|GO:0006468
Psa1g2276 224 Gene3D - 2 98 - -
Psa1g2276 224 ProSiteProfiles Protein kinase domain profile. 1 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2276 Psa-Chr1 176256096 176257507 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2276 98 224 EF-hand Containing Proteins AT3G20410 44.615 4.72e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Psa1g2276 Pkinase 1.7e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2276 - - gmx:100812729 223.787