Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2248 ATGGAGGTTAAATCTCCCACCAAGAACAACAACAATAATGACAAGGGGTCCTCTTTTGAAGTGGATGGTGTCCAGCCTACCCCGAGCCCAATCCGTAAAATGATCGCCGTAGCGTCCATCGCTACTGGCGTTCAGTTCGGATGGGCACTTCAGCTCTCCCTCTTGACGCCATACTCGCAAACTCTCGGAGTTCCGCATGTATGGTCGTCTTTCATCTGGCTCTGTGGCCCAATCTCTGGACTTCTCGTCCAGCCTATAGTAGGTTACTATAGCGACCGAAGCACTTCCCGCTTCGGTCGCAGACGGCCCTTTATATTAAGTGGAGCCTTAGCCGTTGCTGTATCGGTTTTCCTCATTGGTTACGCAGCTGACCTTGGCCACTCCATGGGCGACGACTTGTCCAAAAAAACCCGACCACGGGCCGTCGCTATCTTCGTCGTTGGCTTCTGGATCCTCGATGTTGCTAACAACATGCTCCAGGGACCATGTCGCGCTTTTCTCGCAGACCTTGCAGCCGGGGACGAGAAAAAGACAAGAACAGCAATGAGTTTCTTCTCTTTCTTCATGGCTGTCGGTAGTATCCTCGGATACGCCGCTGGTTCCTTTGGAAAACTACACAAAATCTTCCCTTTTACGGAAACCGTAGCATGTAATGTCTTCTGCCAAAATCTGAAGACTTGTTTCTTTTTCTCCATCCTCCTCTTAATCTTCCTCGCCAGCTTCGCTCTCATCTACGTTAAGGAAACACCGAAGACGAAGCTAGAGTTGAAAGATGACGACGACAAACAGGTTTCTTGTTTCGGAGAGCTGTTCCATGCATTGAAGGAACTGAAGAGACCAATGTGGATATTGATGTTAGTAACCGCCGTGAACTGGATCGCGTGGTTCCCGTTCTTCTTATTCGACACCGACTGGATGGGCCGTGAGGTGTACGGAGGAGCTCCAGGAGAGAAGGCATATGACACTGGTGTGAGAGTTGGTTCATTAGGACTCATGCTTAATTCTGTAGTTCTTGGGTTAATGTCTCTGGCTGTGGAACCATTGGGGAGAATGGTTGGAGGAATCAAGAGGCTTTGGGGGATAGTCAATTTCATTCTAGCTATTTGTTTGGCAATGACTGTACTCATCACAAAAGTGGCTGAACATGATCGTCATATGACCGGCGGTGCCACCGTCGGACATCCCTCCGAGGGTGTCAAGGCCGGTGCCATGATCTTCTTTGCAGTTCTTGGAATTCCTTTAGCAATTACTTTCAGTGTTCCTTTTGCTCTAGCATCAATATACTCCAGTGCTTCAGGGGCTGGACAAGGTTTATCTCTCGGAGTCTTGAATCTCGCAATTGTGATACCACAGATGTTGGTGTCAGCATTGAATGGACCATGGGATGCTCTATTTGGTGGTGGTAATTTGCCGGCGTTTGTGGTGGGTGCGGTGGCGGCCGCCGTCAGTGCTGTATTGGCGATAGTGTTGCTGCCGTCAGTGAAACCAGATGATGAGGCCAAGGTTAAACTTGCTGCTGGCGGTTTTCATTAG 1533 0.4951 MEVKSPTKNNNNNDKGSSFEVDGVQPTPSPIRKMIAVASIATGVQFGWALQLSLLTPYSQTLGVPHVWSSFIWLCGPISGLLVQPIVGYYSDRSTSRFGRRRPFILSGALAVAVSVFLIGYAADLGHSMGDDLSKKTRPRAVAIFVVGFWILDVANNMLQGPCRAFLADLAAGDEKKTRTAMSFFSFFMAVGSILGYAAGSFGKLHKIFPFTETVACNVFCQNLKTCFFFSILLLIFLASFALIYVKETPKTKLELKDDDDKQVSCFGELFHALKELKRPMWILMLVTAVNWIAWFPFFLFDTDWMGREVYGGAPGEKAYDTGVRVGSLGLMLNSVVLGLMSLAVEPLGRMVGGIKRLWGIVNFILAICLAMTVLITKVAEHDRHMTGGATVGHPSEGVKAGAMIFFAVLGIPLAITFSVPFALASIYSSASGAGQGLSLGVLNLAIVIPQMLVSALNGPWDALFGGGNLPAFVVGAVAAAVSAVLAIVLLPSVKPDDEAKVKLAAGGFH* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2248 510 Gene3D MFS general substrate transporter like domains 27 491 IPR036259 -
Psa1g2248 510 PANTHER SUGAR TRANSPORTER 24 500 - -
Psa1g2248 510 Pfam MFS/sugar transport protein 39 294 - -
Psa1g2248 510 CDD MFS_SLC45_SUC 34 470 - -
Psa1g2248 510 TIGRFAM GPH_sucrose: sucrose/H+ symporter 30 496 IPR005989 GO:0005887|GO:0008515|GO:0015770
Psa1g2248 510 MobiDBLite consensus disorder prediction 1 23 - -
Psa1g2248 510 ProSiteProfiles Major facilitator superfamily (MFS) profile. 31 495 IPR020846 GO:0022857
Psa1g2248 510 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 24 500 - -
Psa1g2248 510 SUPERFAMILY MFS general substrate transporter 33 496 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2248 Psa-Chr1 171378027 171380126 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2248 3 510 Sucrose Transporter Gene Family AT1G22710 65.504 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2248 K15378 - gmx:100784153 736.487