Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2226 ATGGCTTGTAACACATTGATGAGTTCAGCTTTCTCAGCTTTTCCATCTCTTCTTTCTTCCTCAAAATCAAGATTTTCAACTTCAACTCCACTTCCTTATGTTGCTTCTGCCAATGCTTCTTCTAGATTCACCATGACTTCTGATTGGATGCCTGGTCAACCTAGACCTTCCTATCTTGATGGTTCAGCTCCAGGTGACTTTGGATTTGATCCTCTTCGTCTTGGTGAAGTACCTGAGAATCTTGAGAGATTCAAAGAGTCTGAACTCATTCACTGCAGATGGGCAATGCTTGCTGTTCCGGGGATTTTGGTACCAGAGGCATTGGGGTTAGGAAACTGGGTGAAAGCACAGGAATGGGCAGCACTTCCTGGAGGACAAGCAACCTACTTAGGAAACCCTGTTCCATGGGGCACCCTACCCACCATTTTGGTCATTGAATTCCTTTCTATTGCTTTTGTTGAGCACCAAAGGAGTATGGAGAAAGACCCTGAAAAGAAGAAATATCCTGGTGGTGCTTTTGATCCTTTGGGCTACTCTAAAGACCCTAAAAAGTTCCATGAATACAAAATCAAAGAAGTTAAGAATGGACGTCTTGCTTTGTTGGCTTTTGTTGGAATATGTGTTCAACAATCAGCGTATCCAGGAACTGGACCTTTGGAGAATTTGGCAACTCACTTGGCTGATCCATGGCACAACAACATTGGAAATGTTCTTATTCCACCACAATAG 729 0.4321 MACNTLMSSAFSAFPSLLSSSKSRFSTSTPLPYVASANASSRFTMTSDWMPGQPRPSYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAALPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKFHEYKIKEVKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGNVLIPPQ* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2226 242 Pfam Chlorophyll A-B binding protein 56 210 IPR022796 -
Psa1g2226 242 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 21 235 IPR001344 GO:0009765|GO:0016020
Psa1g2226 242 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 21 235 - -
Psa1g2226 242 Gene3D Chlorophyll a/b binding protein domain 50 236 - -
Psa1g2226 242 SUPERFAMILY Chlorophyll a-b binding protein 39 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2226 Psa-Chr1 169495349 169496528 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2226 1 197 Chloroplast and Mitochondria Gene Families AT3G54890 79.899 2.53e-107 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2226 K08907 - gmx:100305992 428.328