Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2224 ATGGAGAAGAATCTTGACGAACATTCCAACAGTTTCCCTCAAGAAGATAAGGAAAACAATACCAATGCCGCCGCCGATGACACGCCTCGTTCTCCGTTGCTGGAGACTGAGGACAACGTCGTCGGCGGGGACGGAGAAACTGAAAAGGATGGTGATGTAGATAATGTCGAGGGAGAGGCGGAAGAGGAAAAGGAGGAGGAGAATGAGGAAGGTGTAACCGTCGAGGATACACCTGAAACTCCTCCAAACTTGGAGAAACTTTCAGAAGACATTGATAAATTCCTTGCTGCTACACATGATAACAATGACAATGACGAAGAGATGATTCCTGAATTCATTGACAAGTTTTTAGATCTGGTGGAAGAGAAAATGATGAGGTACGACTCTAATCAAACAAAATGGGGTGAGGATGTGGAGGAAGATTCATTGTTGTTGGAAGGCGTGAACCGTGTTTCAAAGCTGGTGAAGTTGTTAACCACAATTATCACAGAGTTTCAATCTAGAGAAGAAGAGAAAAAAGGAGGTGAAGAAGAAGATGAAAAAAAAGAAGGAGATGAAGAACAAGAAGAAAAGGAAGAGAAAAAAGCGAAAAAGGATCGATCAATATTGTTGAACCGGGTTGGCGTGATTCAACAACGAGCGATGTCGTATTTGGAGGAAGAGTTCCGTTTGTTAATGGAAGAATCTAGAATCCAAAACAAATCAGATTCAACACATGACTCTAAAGGGAAACACGCTGCAGCACCAGAGTCACCAGAATCAACGGAAACGGTTATGGATTTCCCGGGTTTTAAGGAGGAGGCCATTACAGTTTTGAACAAAATAGCGCGGGAGATGTTATTTGCAGGTTATGATTCAGAATGCTGCCACGTGTACACCGTTTCGAGAAAGCATGGTTTCGGAGACGGTTTACACAAGCTAGGGTACGAAAGGATCAGCATGGAAGAGGTTCAGAGAATGCAATGGGAATCATTGGAGAGAGAGATTCCAACGTGGATCAACACGTTCAAAGAATGTGCCACCGTGTGGTTTCCCGGAGAACGAAAACTCGCTGCATCGATCTTCGCCGAGCATCCGTCGGTGGCTGACACACTCTACACCAACCTCACGCGCGTCGTGGCGTTTCAGCTTCTCAACTTTGCTGAAAGCGTCGCGATGACAAAACGTGCGGCAGAGAAGCTCTTCAAGTTTCTTGACATGTACGAAACCTTGAGAGACACGATTCCAAATCTCGACAAACTCTACCCTGAGGAAATCGTCGATGAAACCAAAGCTGAAGTGACATCTGCAAAGAACCGCCTTGGCGAGGCTGCTGTGTTGATATTCTGCGAACTTGAAAACTCAATCAAATCGGATACTGGAAAAACTCCGGTCGCAGGCGGCGCTGTTCACCCACTAACTCGCTACATAGTAAACTACCTGAGACTTGCGTGCGAGTATAAAGACACATTGGAAGAAGTTTTCAAAGAACATTCAAAGATCGAGCGTTCTGATTCAACAAGTAGGCCTAATTACGACAATCAAAGCCACAACGACAATCAGAAGCCGAACGAGAAAGAAAACGTGTCCCCGTTTGCAGCACAGTTGACACGTTTAATGGAATTACTCGACACGAATCTCGAAGGAAAAGCAAAACTCTACAAAGAAGTTCCATTAAGTTGCATCTTCATGATGAACAATGGAAGGTACATTGTTCAAAAAATCAAAGGATCACCTGAAATCTACGAAGTAATGGGCGAAACATGGTGCCGTAAAAGATCCACAGAACTGAGAACTTATCACAAAAACTATCAAATAGAAACATGGAGCAAGATATTGAGTTGTTTAAGTCCAAAAGGTTTGAATGATAACGGAAAAGTTCATAAGCCAGTGCTGAAAGAAAGGTTCAAGAGTTTCAATGCATTGTTCGAGGAGATACATAAAACACAAAGCACTTGGGTTGTGAGCGATGAACAACTTCAATCTGAGCTACGAGTTTCAATATCAGCACTTGTGATTCCGGCTTATAGATCATTTCTGGGTAGGTTTTCGCAGTATTTGGATCCGGGGAGACAAACCGAGAAATATATTAAGTTTCAAGCTGAGGATATAGAGACTTATATTGATGAGTTGTTTGATGGGAATCCTCATCATCAAGCTATGGTCAGGAAGAAAGCTTGA 2160 0.4324 MEKNLDEHSNSFPQEDKENNTNAAADDTPRSPLLETEDNVVGGDGETEKDGDVDNVEGEAEEEKEEENEEGVTVEDTPETPPNLEKLSEDIDKFLAATHDNNDNDEEMIPEFIDKFLDLVEEKMMRYDSNQTKWGEDVEEDSLLLEGVNRVSKLVKLLTTIITEFQSREEEKKGGEEEDEKKEGDEEQEEKEEKKAKKDRSILLNRVGVIQQRAMSYLEEEFRLLMEESRIQNKSDSTHDSKGKHAAAPESPESTETVMDFPGFKEEAITVLNKIAREMLFAGYDSECCHVYTVSRKHGFGDGLHKLGYERISMEEVQRMQWESLEREIPTWINTFKECATVWFPGERKLAASIFAEHPSVADTLYTNLTRVVAFQLLNFAESVAMTKRAAEKLFKFLDMYETLRDTIPNLDKLYPEEIVDETKAEVTSAKNRLGEAAVLIFCELENSIKSDTGKTPVAGGAVHPLTRYIVNYLRLACEYKDTLEEVFKEHSKIERSDSTSRPNYDNQSHNDNQKPNEKENVSPFAAQLTRLMELLDTNLEGKAKLYKEVPLSCIFMMNNGRYIVQKIKGSPEIYEVMGETWCRKRSTELRTYHKNYQIETWSKILSCLSPKGLNDNGKVHKPVLKERFKSFNALFEEIHKTQSTWVVSDEQLQSELRVSISALVIPAYRSFLGRFSQYLDPGRQTEKYIKFQAEDIETYIDELFDGNPHHQAMVRKKA* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2224 719 MobiDBLite consensus disorder prediction 1 88 - -
Psa1g2224 719 MobiDBLite consensus disorder prediction 233 249 - -
Psa1g2224 719 MobiDBLite consensus disorder prediction 167 197 - -
Psa1g2224 719 Gene3D Exocyst complex component Exo70 180 714 - -
Psa1g2224 719 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 59 710 - -
Psa1g2224 719 Pfam Exo70 exocyst complex subunit 332 703 IPR046364 GO:0000145|GO:0005546|GO:0006887
Psa1g2224 719 MobiDBLite consensus disorder prediction 233 257 - -
Psa1g2224 719 MobiDBLite consensus disorder prediction 50 74 - -
Psa1g2224 719 SUPERFAMILY Cullin repeat-like 200 706 IPR016159 -
Psa1g2224 719 Coils Coil 177 197 - -
Psa1g2224 719 MobiDBLite consensus disorder prediction 491 522 - -
Psa1g2224 719 PANTHER EXOCYST COMPLEX PROTEIN EXO70 59 710 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2224 Psa-Chr1 169463249 169468420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2224 55 708 EXO70 exocyst subunit family AT5G13990 49.710 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2224 K07195 - gmx:100819960 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g3822 3 344593724 344596436 Psa1g2224 1 169463249 169468420 PCT