Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2207 ATGTCAACTGAAGTAGTGAAGAAAGAAGGGTCTCTAAATCTGAAAATCACTAGCAAAAGCTATGTGAAACCAGATGGAAAAATAGGAAAAAAAGAGTATCAATTGGTCACATTTGACCTACCTTACCTAGCTTTTTACTACAACCAAAAACTGATTTTCTACAAAGGAGGTAACTTTGAAGAGAATGTTGAGAAGCTGAAGAATGGGCTTGGTGTTGTTTTGAAGGAGTTTCATCAACTTGCTGGTAAAATAGGAAAAGATGAAGAGGGTGTTTTCTTGGTTGAATATGATGATGATATGGTTGGTGTTGAAGTTGTTGAAACCGTTGCTAATGAGATTAGTGTCGAAGATCTAACCGTTGCTGAAAGTAATGCTAGTTTGAAGGAATTGATTCCTTATGGTGGAATCTGTAATTTGGAAGGCATGCATAGACCTTTGTTGGCTGTTCAGTTGACAAAGCTCAAAGATGGGCTCGCCATGGGCTTGGCTTTTAACCATGCTGTCCTGGATGGAACTTCCACATGGCACTTCATGACTTCATGGGCCGAGACATGCAGCGGTACACCCTCCACGACAGCCCCACCATTCTTGGAGAGGACCAAGGCCCGAAACACACGCGTGAAGCTTGATCTCTCTTTACCCGAGCCCAATGTCCCACCACCATCTGCTAATGGTGAGGCAAAGCCAGAGAGCGAAGGCCTTCCACCACCGCCGAATGGTGGAACAAAGCCCGAGCCCGTACTAAGAGAAAAGATTTTCAAATTCTCTGAATCAGCTATCGACAAAATCAAGTCAACTGTCAATCAAACCCTTCCATCCGACGGTTTAAAACCATTCTCAACATTTCAAGCTCTCTCAACTCACATTTGGCGCCATGTGACTCTCGCACGTGACCTAAAACCCGAAGACTACACGGTTTTCACCGTCTTCGTGGATTGTAGAAAACGAGTGGATCCACCAATGCCAGAGGCCTACTTTGGAAACCTAATTCAAGCCATATTCACGGTTACGGCCGCCGGGCTTTTGTCGGCCCACCCTCCACAATTCGGCGCTTCCTTGATCCAAAAGGCAATAGAAGCCCACGATGCAAAAGCCATCGACGAACGTAACAAAGAGTGGGAGAGTTCACCCAAGATATTTGAATTCAAAGATGCTGGAATCAATTGTGTGGCAGTTGGAAGTTCACCAAGGTTCAAGGTTTATGACATTGATTTTGGATGGGGGAGGCCAGAGAATGTGAGAAGTGGAACTAATAACAAGTTTAATGGAATGATATATTTGTATCCGGGGAAGAGTGGAGGGAGAAGCATTGATGTTGAACTAACATTGGAGCCTGAGGCTATGGGAAAGTTGGAGCAAGATAAGGAGTTTCTTATGGAGAATATAATATAA 1392 0.4411 MSTEVVKKEGSLNLKITSKSYVKPDGKIGKKEYQLVTFDLPYLAFYYNQKLIFYKGGNFEENVEKLKNGLGVVLKEFHQLAGKIGKDEEGVFLVEYDDDMVGVEVVETVANEISVEDLTVAESNASLKELIPYGGICNLEGMHRPLLAVQLTKLKDGLAMGLAFNHAVLDGTSTWHFMTSWAETCSGTPSTTAPPFLERTKARNTRVKLDLSLPEPNVPPPSANGEAKPESEGLPPPPNGGTKPEPVLREKIFKFSESAIDKIKSTVNQTLPSDGLKPFSTFQALSTHIWRHVTLARDLKPEDYTVFTVFVDCRKRVDPPMPEAYFGNLIQAIFTVTAAGLLSAHPPQFGASLIQKAIEAHDAKAIDERNKEWESSPKIFEFKDAGINCVAVGSSPRFKVYDIDFGWGRPENVRSGTNNKFNGMIYLYPGKSGGRSIDVELTLEPEAMGKLEQDKEFLMENII* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2207 463 MobiDBLite consensus disorder prediction 209 243 - -
Psa1g2207 463 Gene3D - 228 454 IPR023213 -
Psa1g2207 463 Gene3D - 11 212 IPR023213 -
Psa1g2207 463 PANTHER BAHD ACYLTRANSFERASE DCR-RELATED 17 457 - -
Psa1g2207 463 Pfam Transferase family 14 457 - -
Psa1g2207 463 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 17 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2207 Psa-Chr1 167652956 167656174 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2207 46 460 Monolignol Biosynthesis Gene Families AT5G48930 27.483 3.29e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2207 K19747 - gmx:100790669 762.681