Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2206 ATGTTCTCCTCAATTGTCATGGCATCACTCAACAACAACCAAGCCAACAATGATCTTGAGGAACAATCATCAACAATAACAACATTAGAAGTTGAAACAAAAGATTTTGACTACTCAAAAAGAGCACAATGGCTACACGCCACAGTCTTAGGCGCTAACGACGAATTAGTCTCTACAGCTTCGCTGAGGATGGGTGCCGGGGCAGTCAAACAAGACATCAAGGCAATGATCTTAAACGGTTTCGCCGCTGCATGCAGCAAGGCTATAGGTGAATTTGTTTCTGGAGACTCACAACTCGACTTTGAAGTTGCTCAAATGAAAAGAGAGAGAGAGCGAGAGAAAGAGGAAGAGAAGTTGATGATATTAAAGAGAAAAAAGGTTTGCCTAATCCTTTACAAGCAGCAGCAGCTTTAG 414 0.4227 MFSSIVMASLNNNQANNDLEEQSSTITTLEVETKDFDYSKRAQWLHATVLGANDELVSTASLRMGAGAVKQDIKAMILNGFAAACSKAIGEFVSGDSQLDFEVAQMKREREREKEEEKLMILKRKKVCLILYKQQQL* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2206 137 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 11 116 IPR008217 GO:0005384|GO:0030026
Psa1g2206 137 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 11 116 - -
Psa1g2206 137 Coils Coil 12 32 - -
Psa1g2206 137 Pfam VIT family 46 118 IPR008217 GO:0005384|GO:0030026
Psa1g2206 137 Coils Coil 105 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2206 Psa-Chr1 167638503 167639155 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2206 11 119 Nodulin-like Gene Family AT3G43660 60.177 1.65e-38 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2206 K22736 - zju:107406772 127.487