Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2202 ATGCTAAAGCGCTCCGCCCGCCAGCCACAGGCACCGGCGCCGGAGTCGCTCATCGATAAGATCTACCAATTCCGTGGCGCCTGTCTAATGGTGGCACTCCCTCTGCTCCTCGTCACACTCATACTCTACATCATTCCTTCCACCTCTTCCCATGAATCCATCGAGGATTACGCTCTAACGCACCGTAAGATTTCTCCTGATCGTAAACTGTCCGATTCGTTTGCTGTCATTTTCGACGCTGGTAGCTCCGGTAGCCGTGTCCATGTCTTTCGCTTTGATCGGAACCTTGATCTTGTTCACATTGGTAATGATCTCGAGGTTTTCTTGCAGATAAAACCTGGTTTGAGTGCTTATGCACAGGATCCACGACAGGCAGCGGAATCTCTTATTTCTCTTTTGGATAAAGCAGAAAGTGTCGTTCCTATGGAGTATCGCCCTATGACACCTGTTAGAGTTGGGGCAACTGCAGGATTGAGGGCTTTGGAAGGGGATGCTTCTGATAGGATCTTGCAAGCGGTCCGAGATTTGCTTAAGCAAAGAAGTACACTAAAATCAGAGCCTGGTGCAGTTGCTGTGCTTGATGGAACCCAAGAAGGTGCTTTTCAATGGGTGACTATTAACTATCTATTGGGAAAGTTGGGAAGAGATTATTCAGACACTGTCGGGGTAGTTGATCTTGGAGGTGGATCTGTTCAAATGGCATACGCCATCTCAGAGACAAGTGCTACCAAGGCTCCAAAAGTACCTGATGGCGAAGACCCTTATGTCAAGGAAATGTTCCTAAGGGGAAGGAAATATTACCTCTATGTTCACAGTTACTTACGCTATGGTTTACTAGCAGCTCGGGCAGAGATTTTAAAGATTTCAGATGATTCTGGAAACCCTTGCATTTTAGCTGGCTATGATGGGTCATACAATTATGGAGGAAAGTCATTTAAGGCCTCATCCTCCCCTTCTGGCTCAAGCTTGAATGAATGTAAAGGCATAGCTCTTAAGACTCTCAAGGTTAATGAGTCAATATGTACACATATGAAGTGCACTTTTGGTGGGATATGGAATGGTGGCGGCGGCGATGGACAGAAGAACCTTTTTGTCGCCTCATTTTTCTTCGACCGGGCTGCGGAGGCTGGTTTTGCTGATCCAAAGTCACCTGTCGCAAAGGTTCGTCCAGTGGATTTTGAGAAAGCAGCAAAGCTAGCTTGTCAAACAAAACTCGAGGATGCCAAATCCACTTATCCAAACGTCGAGGAAGGGAACCTTCCATATTTATGTATGGATCTTGTATACCAGTATACACTGCTTGTTTTTGGACTCGGCCTAGATCAAATGCAGCAGATTACATTAGTGAAGCAAGTTAAATATCATGATTCTCTTGTTGAAGCTGCATGGCCCCTAGGCAGCGCCATAGAAGCTGTATCATCTATACAATGA 1431 0.4605 MLKRSARQPQAPAPESLIDKIYQFRGACLMVALPLLLVTLILYIIPSTSSHESIEDYALTHRKISPDRKLSDSFAVIFDAGSSGSRVHVFRFDRNLDLVHIGNDLEVFLQIKPGLSAYAQDPRQAAESLISLLDKAESVVPMEYRPMTPVRVGATAGLRALEGDASDRILQAVRDLLKQRSTLKSEPGAVAVLDGTQEGAFQWVTINYLLGKLGRDYSDTVGVVDLGGGSVQMAYAISETSATKAPKVPDGEDPYVKEMFLRGRKYYLYVHSYLRYGLLAARAEILKISDDSGNPCILAGYDGSYNYGGKSFKASSSPSGSSLNECKGIALKTLKVNESICTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFADPKSPVAKVRPVDFEKAAKLACQTKLEDAKSTYPNVEEGNLPYLCMDLVYQYTLLVFGLGLDQMQQITLVKQVKYHDSLVEAAWPLGSAIEAVSSIQ* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2202 476 Pfam GDA1/CD39 (nucleoside phosphatase) family 71 475 IPR000407 GO:0016787
Psa1g2202 476 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 2 474 IPR000407 GO:0016787
Psa1g2202 476 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 193 208 IPR000407 GO:0016787
Psa1g2202 476 CDD NBD_sugar-kinase_HSP70_actin 76 235 - -
Psa1g2202 476 Gene3D Exopolyphosphatase. Domain 2 194 453 - -
Psa1g2202 476 PANTHER APYRASE-LIKE PROTEIN 2 474 - -
Psa1g2202 476 Gene3D - 74 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2202 Psa-Chr1 167155073 167159191 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2202 15 474 Calmodulin-binding Proteins AT3G04080 67.826 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2202 K14641 - gmx:100804818 754.207