Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2118 ATGGCTCATAAGCAGGCGAGTACAAGTATTTTTGTTGGATTGAACAAGGGCCATATTGTTACCAAGAAGGAGTTGGCTCCACGCCCCTCCAGTCGTAAAGGGAAAACAAGCAAGCGTGTGCACTTTGTAAGGAACCTCATCCGCGAGGTTGCTGGCTTTGCACCCTCTGAAAAGCGAATCACTGAATTGCTGAAGGTGGGAAAGGGTAAGAGGGCACTGAAAGTTGCAAAGAGAAAGCTTGGAACCTACAAGCGCGCAAAGAAGAAGCGTGAGGAGATGTCTAATGTTCTTCGAAAGATGAGGGCTGGTGGAACAGGTGATAAGAAGAAATAA 333 0.4715 MAHKQASTSIFVGLNKGHIVTKKELAPRPSSRKGKTSKRVHFVRNLIREVAGFAPSEKRITELLKVGKGKRALKVAKRKLGTYKRAKKKREEMSNVLRKMRAGGTGDKKK* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2118 110 MobiDBLite consensus disorder prediction 86 110 - -
Psa1g2118 110 PANTHER 60S RIBOSOMAL PROTEIN L36 1 110 IPR000509 GO:0003735|GO:0005840|GO:0006412
Psa1g2118 110 Gene3D 60S ribosomal protein L36 1 107 IPR038097 -
Psa1g2118 110 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 1 110 - -
Psa1g2118 110 MobiDBLite consensus disorder prediction 85 110 - -
Psa1g2118 110 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2118 Psa-Chr1 156764560 156765568 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2118 1 110 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 76.364 4.87e-54 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2118 K02920 - zju:107414508 195.667