Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2099 ATGCTTCAGTTAGTTCCAGAACAAAGTGAAGAATACCCGTTAGAACATCAAGATGGAGATAGACTTCAGAGACCACTAATTCGCGGCAGTGCAAATGCTTATGAAACTTCCAATGGGGATAGTGAAGAGGGACAAGATCTTTCTGTCTATCCAATCACTGGAAGCTCACCTAATCCAAAACAAACATTCGACTTTGCACAGTATTATGCCTTTAATTTGACAATATTTGCACCGACTCTGGTATACTGTTCATTTAGTCTACTTGTTGTTCCTGTTGGTGCTGTTTATTTTGGTGCAAGGGGACTCTATGAAGCTGCAAGCAATTTTCACCCTTGGACTATTAGTCTTGAGGCTTTATTCAATTTTTGTAATAGGAAATTGTCCCTCAAAACTGTTCTCATGCTTGCTGATCAAATGATAAATCGAGTCGGATATGTTCATACGAAGTCATTTTTACACCGGGACATCAAGCCAGACAATTTCCTCGTGGGTTTAGGGAGGCGTGCAAATCAAGTGTACGTCATTGACTTTGGTCTTGCTAAGAAATTCAGAGACAGTAATAATCAGCATATTCCCTACAGAGAGAATAAGAATTTGACGGGAACTGCTAGGTATGCCAGTATGAATACTCATCTTGGAATTGAACAAAGCCGCAGAGATGATTTAGAGTCACTTGGATATGTTCTTATGTATTTTTTAAGAGGAAGTCTGCCTTGGCAGGGATTGAAAGCCGGTACCAAAAAGCAGAAGTATGAGAGAATCAGTGAGAAGAAAGTTTCTACTTCGATTGAGTCTCTCTGTCGTGGCTATCTCTCAGACTTTGCATCATACTTCCATTATTGTCGGTCACTGAGGTTTGATGATAAACCAGATTATGCTTATCTGAAAAGACTTTTGCGTGATCTATTCATCCGTGAAGGATTCCAGTTTGATTATGTCTTCGATTGGACCATTTTGAAATATCAGCAATCTCAAATTTCCACTCCTCCTTCCCGTGGTATTGGTCTCGCTGCCGGACCAAGTTCTGGTCTGCCACTAGCTTCTGCAAATAACGACGGACAGTCAGGTGGAAAAGATGGTAGATATATTGGATGGTCTTCAACTGATCCCACTCGTAGGAGAAACTCTGGACCCATTGCCATTGATGGAATCGTATCTAGAGAGAAAGCCCCGGTTACCAATGATTTAACTGGATCTAAAGATGCTATGTTGCCAAGTTCGAATTTCTTTCGGTCAAGTGGATCTGCAAGGCCAAAATGCCATCTTAAGCAGCAGCCGTGA 1281 0.413 MLQLVPEQSEEYPLEHQDGDRLQRPLIRGSANAYETSNGDSEEGQDLSVYPITGSSPNPKQTFDFAQYYAFNLTIFAPTLVYCSFSLLVVPVGAVYFGARGLYEAASNFHPWTISLEALFNFCNRKLSLKTVLMLADQMINRVGYVHTKSFLHRDIKPDNFLVGLGRRANQVYVIDFGLAKKFRDSNNQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYERISEKKVSTSIESLCRGYLSDFASYFHYCRSLRFDDKPDYAYLKRLLRDLFIREGFQFDYVFDWTILKYQQSQISTPPSRGIGLAAGPSSGLPLASANNDGQSGGKDGRYIGWSSTDPTRRRNSGPIAIDGIVSREKAPVTNDLTGSKDAMLPSSNFFRSSGSARPKCHLKQQP* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2099 426 SUPERFAMILY Protein kinase-like (PK-like) 114 316 IPR011009 -
Psa1g2099 426 MobiDBLite consensus disorder prediction 349 426 - -
Psa1g2099 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Psa1g2099 426 Pfam Protein kinase domain 119 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g2099 426 SMART serkin_6 86 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g2099 426 PANTHER CASEIN KINASE-RELATED 115 418 - -
Psa1g2099 426 MobiDBLite consensus disorder prediction 399 426 - -
Psa1g2099 426 ProSiteProfiles Protein kinase domain profile. 1 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g2099 426 Gene3D Transferase(Phosphotransferase) domain 1 111 333 - -
Psa1g2099 426 PANTHER CASEIN KINASE 1-LIKE PROTEIN 2 115 418 IPR030509 GO:0004672|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2099 Psa-Chr1 154522766 154524129 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2099 127 308 MAP Kinase Kinase Kinase AT1G62400 28.261 3.94e-10 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Psa1g2099 Pkinase 1.2e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2099 K02218 - gmx:100787808 523.857