Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2075 ATGTACACAAATGAATGGGAATTATCTGAACATGAAAGCTTTGAGCCTTTCAGCATAGTAACTCCTCTAGAAGATATAACAACAATCATTCATGAAACAAATAAGAGCTTTCAACCTCAACAACAGTACTATCAGCAACAGATTGAGTTTCCTATTTGGAGCAATGAATTTTCCATGGAAACCACAACTGAATCACCTTTTCAGTTTTTCCAAGAGAACTACTCAAACAATATCGCCAAACAAGATCAACCAACTACCTCTTTTGATTTCGTTGTTGAATCTTTAATGTCTGCTAGCAGTGAAGATAGTATTTCTTATTCCGAGAAGTGTAGTGAACTTGCCTCTTGTTCTGATAACAAGCCAATTTGTGAGAACTCTCCACAACAACATAAGAAGGTGCTGGAGGGTTATTCTGCGTTACATCAGAAGTCTCGTGAAATTTCCTTTCAGAAAACTCAGTTGGAGTCATGTATAAACCAAGACAAGCAATGTTCACCTTGTGGATTTGATTTTTCAACATCTACCAACTGTGATTCTAAGGTAACTACAAGGGCTAAAAGAAGATTGAGATGGACAAAAGAAATGCATGAGCCATTTGTTATGATTGTAAACCAGCTCGGTGGTCCAGAAAAGGCAAAGCCTAAGGCTATACTTCAGATGATGGGTTTGGATGTTTTGAACATTTCTCATGTTAAAAGTCATTTGCAGGTATTACTAGGCATGATGGAATCAGAACTTGTGTCCTATGATGTTGGTCCATAG 762 0.374 MYTNEWELSEHESFEPFSIVTPLEDITTIIHETNKSFQPQQQYYQQQIEFPIWSNEFSMETTTESPFQFFQENYSNNIAKQDQPTTSFDFVVESLMSASSEDSISYSEKCSELASCSDNKPICENSPQQHKKVLEGYSALHQKSREISFQKTQLESCINQDKQCSPCGFDFSTSTNCDSKVTTRAKRRLRWTKEMHEPFVMIVNQLGGPEKAKPKAILQMMGLDVLNISHVKSHLQVLLGMMESELVSYDVGP* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2075 253 SUPERFAMILY Homeodomain-like 184 238 IPR009057 -
Psa1g2075 253 Gene3D - 185 239 - -
Psa1g2075 253 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 9 236 - -
Psa1g2075 253 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 9 236 IPR044848 GO:0003700
Psa1g2075 253 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 186 238 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2075 Psa-Chr1 150738307 150739903 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2075 170 236 G2-like Transcription Factor Family AT4G13640 53.521 1.66e-16 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Psa1g2075 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2075 - - mtr:MTR_1g053800 278.485