Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2065 ATGCCTACAGGTGAGACGGTTGCAGTTAAAGTTCTTGGTGCTAATTCAAGACAAGGAGAACAAGAATTTTTAACTGAGGTTCTGTTACTTGGAAGATTACATCACAAAAACCTTGTGGCTTTGGTGGAATATGCTGCGGAAAGAGGACGACATATGCTCCTTTACATTTACATGAGCAATGGCAGTCTTGCTTCTCATTTATATGGAAAAGATTATGAGCCATTAAGCTGGGATTTGAGACTTAGCATAGCACTAGATGTTGCAAGGGTGCTGGAATATCTACATTATGGGGCTGATCCACCTATTGTGCACCATGACTCATTCAAACCAAAGCCATTAAGGAAAAGGAAGAGTTTGTGTCACAGGAGATCTAGTCCAGGGCAGAAGAAAGATGTTAGCTTCCTCACAAATCTTCCAGGAGCATCTGAAAAGTTAAACATTTTCAATGCCGATCCTAGCAGTCCAGAAAGTCTTAATGTAGCAATTGAAGGGTGTGTTGGAATATTTCACACCGCCACTCCGGTTGATTTTGAAGTGAACGAACCGGAAGAAGTAGTGACAAAAAGTACCAATCTAATGGAGCCGATGCAAATGCATTTTCACCAGCTACTCAAAATAATGGTCCTTTATCAGTCTCAAGCTTTAGCCAACTGGGTGCTCACTGAACACTGGTTTTGGAAGGCCCTCTGCACCACAAGTGACCCCTCCAGCGCAGCCTAA 720 0.4278 MPTGETVAVKVLGANSRQGEQEFLTEVLLLGRLHHKNLVALVEYAAERGRHMLLYIYMSNGSLASHLYGKDYEPLSWDLRLSIALDVARVLEYLHYGADPPIVHHDSFKPKPLRKRKSLCHRRSSPGQKKDVSFLTNLPGASEKLNIFNADPSSPESLNVAIEGCVGIFHTATPVDFEVNEPEEVVTKSTNLMEPMQMHFHQLLKIMVLYQSQALANWVLTEHWFWKALCTTSDPSSAA* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2065 239 Pfam Protein tyrosine and serine/threonine kinase 5 106 IPR001245 GO:0004672|GO:0006468
Psa1g2065 239 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 1 106 - -
Psa1g2065 239 SUPERFAMILY Protein kinase-like (PK-like) 3 106 IPR011009 -
Psa1g2065 239 Gene3D Phosphorylase Kinase; domain 1 1 58 - -
Psa1g2065 239 PANTHER OS01G0253100 PROTEIN 1 106 IPR045271 GO:0004714|GO:0006468
Psa1g2065 239 Gene3D - 119 194 - -
Psa1g2065 239 ProSiteProfiles Protein kinase domain profile. 1 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g2065 239 Gene3D Transferase(Phosphotransferase) domain 1 59 111 - -
Psa1g2065 239 SMART tyrkin_6 5 207 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2065 Psa-Chr1 149994896 149996939 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2065 4 106 Receptor kinase-like Gene Family AT2G19230 53.398 6.63e-29 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Psa1g2065 PK_Tyr_Ser-Thr 2.9e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2065 - - lang:109332283 180.259