Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g2044 ATGGCACCTAAAAATCTCACTCTTCTTCTTAACACATGCTTCCTCTTTCTCATATTCCTATCCCTCAAACTTTATATCAACCCTTCAAACCCTAATTCTCATCATGTTTCCACAAAAATATTCAACCATGCTAGAATTCTCACTAGTGACATCATAGTTGATTCATGCAATGAGCTTCATAAATACTCAAATTACACCTCTAAGTGCATTTATGTCAAAACACATCCTGATTGTAGATCAAAGGGTTACATAAACTATCTTCAAATCTTTTATTGTAACCTTGGAAGTTCACCAATTCTTGGCCACACATTACTTTTGTTATGGCTTGTAGTTTTGTTCTATCTTTTAGCCGACACGGCTTCGAATTACTTTTGCACCTCCCTTGAAGGTTTGTCTAATATTTTGAGACTTTCTCCAACTATAGCTGGTGTAACATTGCTTTCTCTCGGTAATGGTGCTCCTGATTTCTTTGCTAGTGTTGTTTCTTTCACAAGTTCAAATAATGGTGCTGTTGGTTTGAATAGCATTTTGGGGGGTGCATTTTTTGTTTCCACAGCTGTTTTAGGTATCATAAGTATTCTAGTTAGTTCGAATGAAGTTGCAGTCGATAAAGCTAGTTTCATTAGAGATGTCATTTTCTTTTTATTCTCTTTGTTCATTCTTCTCATCATCATTTCCATTGGTAAAATTAGTCTTTTTGGTTCAATTTGCTACCTTTCTATCTATTTTCTTTATGTTTGTGCCGTCTCGGCCACACATTTCATCTACGAAGTCGACAAAAAGGAGGTTGAATCTTCATCGTCTTCTGATGATTTAGTTGAATCCGGCATACCATTATTAGGTTATGTCGACGATACTGATACTGATTCTGATCAGAAATCAATATCACAAAACCAAGTTGGTATTGGTATAGAAGAAAGCGAGAAGAAAAATAAAGAATTGTTTTATGGATCTTACTATTTATGGAAGTTTCTAGAAATACTTGAATTACCACTTTGTTTACCGAGAAAACTAACTATACCGGTTGTGAGCGAGGAACAATGGTCGAAACCCTACGCAGTTATATCGGTTACCCTAGCACCGATTTTATTCGCGATTCTTTGTAATACACAAATAGAAAATGTGGATTCAAAGAGTACTTTGGTTGCATATTTAACATCATCATTAATTGGAATTGTTTTTGGAAACATGGCATGTGTGACAACAAAGAGTACAAGACCACCTAGGAGATGTTTGTTCCCATGGCTAGCTGGTGGATTTTCAATGAGTGTGACATGGACTTATATAATTGCTGAGGAACTTGTTTCACTATTGATTTCAATTGGATATGTAATTGGTGTTAGTCCTTCAATTTTAGGGTTAACTGTTCTAGCATGGGGAAATTCTTTAGGAGATTTGATTGCAAATGGTGCTATGGCAAAAAATGGTGGTGTGGATGGAGCACAAATTGCTGTTTCAGGTTGTTATGCTGGTCCTATGTTTAATATGTTGATGGGATTAGGGTTACCTCTTGTTCTTTCAGCTTGGAGTGAATACCCTAATTCTTATGTTGTTCCTAAGGATAGTTCACTTTTGGGGACAATTTTGTTTTTGATGGTAGGAGTACTTTGGTCACTTGTTGTTTTGGTTAAGAAGAATATGAAGCTTGATAAGTTTTTAGGGGCTGATCTTCTAATAACGGAAAGTTCTAGAGCCACTTGCTTCGCTTCTCTGTATGAGGCAGCTGTAACTGCTCAAGCCGTAAGAGATTCACCACCTCCTCCTCAAAAAGACGGCAATCAAGTCACCACGAACACTTCACCACATCCAGATCCCGCTCAACCTTCCACATTCATAGGATTTGCTCCACAATTACAGCAAAGCGAACCATCATTCATGTTTGTAGCAACGCCACTAGTACCAAAACCATAG 1911 0.3715 MAPKNLTLLLNTCFLFLIFLSLKLYINPSNPNSHHVSTKIFNHARILTSDIIVDSCNELHKYSNYTSKCIYVKTHPDCRSKGYINYLQIFYCNLGSSPILGHTLLLLWLVVLFYLLADTASNYFCTSLEGLSNILRLSPTIAGVTLLSLGNGAPDFFASVVSFTSSNNGAVGLNSILGGAFFVSTAVLGIISILVSSNEVAVDKASFIRDVIFFLFSLFILLIIISIGKISLFGSICYLSIYFLYVCAVSATHFIYEVDKKEVESSSSSDDLVESGIPLLGYVDDTDTDSDQKSISQNQVGIGIEESEKKNKELFYGSYYLWKFLEILELPLCLPRKLTIPVVSEEQWSKPYAVISVTLAPILFAILCNTQIENVDSKSTLVAYLTSSLIGIVFGNMACVTTKSTRPPRRCLFPWLAGGFSMSVTWTYIIAEELVSLLISIGYVIGVSPSILGLTVLAWGNSLGDLIANGAMAKNGGVDGAQIAVSGCYAGPMFNMLMGLGLPLVLSAWSEYPNSYVVPKDSSLLGTILFLMVGVLWSLVVLVKKNMKLDKFLGADLLITESSRATCFASLYEAAVTAQAVRDSPPPPQKDGNQVTTNTSPHPDPAQPSTFIGFAPQLQQSEPSFMFVATPLVPKP* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g2044 636 MobiDBLite consensus disorder prediction 589 612 - -
Psa1g2044 636 MobiDBLite consensus disorder prediction 580 612 - -
Psa1g2044 636 Pfam Sodium/calcium exchanger protein 416 555 IPR004837 GO:0016021|GO:0055085
Psa1g2044 636 Pfam Sodium/calcium exchanger protein 106 248 IPR004837 GO:0016021|GO:0055085
Psa1g2044 636 PANTHER CATION/CALCIUM EXCHANGER 1 2 560 - -
Psa1g2044 636 Gene3D - 137 268 IPR044880 -
Psa1g2044 636 Gene3D - 349 560 IPR044880 -
Psa1g2044 636 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 2 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g2044 Psa-Chr1 148728956 148731986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g2044 54 576 Antiporters AT5G17860 50.763 5.37e-170 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g2044 K13754 - gmx:100818583 794.267