Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1992 ATGGTGTCTCAAAGTGGAACAGTTCAAGAGTCAAAGACTGCACCTTTATCTAGGTCAGGATCTTTGTATAATCTAACCCTTGATGAAGTACAAAACCATCTTGGTAATTTAGGGAAACCACTTGGAAGTATGAACCTTGATGAGCTTCTCAAGAGTGTGTGGAGTGTTGAAGCTGGCGAGGTTTCTGATTTCGGTAGAGATGGTGCTGCTAACATGCAGCAGAATCAACATAGCGAGATGAATCGACAGGGAAGTTTAACATTATCTGGTGATATTAGCAAGAAAACTGTTGATGAAGTATGGAAAGATATGCAAGTAAAGAAGAGGGGTGTTGATAGGGATATGGAAGCGCGCGAAAGACAACAAACACTCGGTGAAATGACTTTGGAGGATTTCTTGGTGAAAGCTGGTGTTGTTGGTGAATCTTTTCATAATAAGGAAGGCGGTGATTTGTTAAGAGTTAGTTCGAGTGAGGATTCTCGGCAAAATGTATCACTGCATGATCATCATTGGATGCAATTTCAGCTTCCTTTGACGACGCAGCAGCCTCCACAGCATCAGCATGAAAAGCATTTGATGCCTGCTTTTATGGCTGTTCATGCCATTCAACAACCTTTTCAAGTTGCAAGGAATCCAGTTTTGGATGCAGCAATGTCACCGTCTTCTTTAATGGGTGTTTTTTCAGATACACAAACACTAGGTCGAAAAAGGGTTGCTTCAGGTATAGTGGTAGAGAAAACTGTGGAGAGGAGGCAAAAGAGGATGATTAAAAATCGGGAATCTGCTGCTCGGTCACGAGCTAGAAGACAGGCCTATACACAAGAACTGGAACTTAAAGTTTCGCGCTTAGAAGAAGAAAACGAAAGGCTTAGACGACAGAATGAGATAGAGAAGGAGGTGCCATGTGCGCCACCACCCGAGCCTAAGAATCAGCTTCGCAGAACTAATTCAGCATCCTTCTGA 963 0.4289 MVSQSGTVQESKTAPLSRSGSLYNLTLDEVQNHLGNLGKPLGSMNLDELLKSVWSVEAGEVSDFGRDGAANMQQNQHSEMNRQGSLTLSGDISKKTVDEVWKDMQVKKRGVDRDMEARERQQTLGEMTLEDFLVKAGVVGESFHNKEGGDLLRVSSSEDSRQNVSLHDHHWMQFQLPLTTQQPPQHQHEKHLMPAFMAVHAIQQPFQVARNPVLDAAMSPSSLMGVFSDTQTLGRKRVASGIVVEKTVERRQKRMIKNRESAARSRARRQAYTQELELKVSRLEEENERLRRQNEIEKEVPCAPPPEPKNQLRRTNSASF* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1992 320 Gene3D - 248 301 - -
Psa1g1992 320 SMART brlzneu 246 314 IPR004827 GO:0003700|GO:0006355
Psa1g1992 320 MobiDBLite consensus disorder prediction 281 298 - -
Psa1g1992 320 SUPERFAMILY Leucine zipper domain 250 297 IPR046347 GO:0003700|GO:0006355
Psa1g1992 320 Coils Coil 269 300 - -
Psa1g1992 320 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 248 293 IPR004827 GO:0003700|GO:0006355
Psa1g1992 320 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 318 IPR043452 GO:0003700|GO:0045893
Psa1g1992 320 MobiDBLite consensus disorder prediction 281 320 - -
Psa1g1992 320 PANTHER BZIP TRANSCRIPTION FACTOR 2 318 - -
Psa1g1992 320 Pfam bZIP transcription factor 250 295 IPR004827 GO:0003700|GO:0006355
Psa1g1992 320 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 253 268 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1992 Psa-Chr1 144408397 144411185 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1992 1 320 bZIP Transcription Factor Family AT3G56850 58.025 3.33e-106 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa1g1992 bZIP_1 3.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1992 K14432 - gmx:100170741 357.451