Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1917 ATGGTAGTGGATCCTTCTTTTCCTCAACCATCCAAAAGAAGAAGAATCAACCACTTTTATTCCATGGCAACAATTAGAGAGATGAGTGAAAGATTTGGACGAGAGATTCGTGTTTTTGAAACATTTTCACTTTCTCCAACACAAAATGATGCAGCAAACAAAGAAGAGGAGACCGACGAGTTCTACGAGTTCACTGCTGCAGATTATTACAAACTCTTGGGTACTAAAAAAGAAGATAAATATCTAAAGACTCGAAAACTCCGAGAAGCAGATGAGGCAGCTCGCAGGTCAAAAATAACAAAGGCTGTGATTAGAGTTCGCTTCCCGGATAATCATACATTGGAAGCTACCTTTCATCCCTCAGAAACCATCCAAAGTTTAATCGATCTCCTCAACAAAGTGATTGCACAACCAGAGAAGCCCTTTTATTTATATACTACTCCACCGAAGAAGCTGATCAAAGACTTTTCTCAGGATTTCTATACTGTCGGATTTTGTCCTGGTGCCATTGTGTACTTTTCGTATGATGTTTCAAAAGGAAATAGCAGCGAAGACGGCCCTTACCTACTAGAAGAAGTGATGTCTTTGAAAGGTGCTATAGATCAAGGTGAGCCGTCAGAGCCATTACAGTCTGAACCGGTGTCTGCTGAGCCTGTTGCACAAGCTCCTGCCGTTGAAGAACGAAAACCGGCCGAGAAAAAGATTGTTAAGCCAAAGTGGTTGAAAATGTGA 732 0.4139 MVVDPSFPQPSKRRRINHFYSMATIREMSERFGREIRVFETFSLSPTQNDAANKEEETDEFYEFTAADYYKLLGTKKEDKYLKTRKLREADEAARRSKITKAVIRVRFPDNHTLEATFHPSETIQSLIDLLNKVIAQPEKPFYLYTTPPKKLIKDFSQDFYTVGFCPGAIVYFSYDVSKGNSSEDGPYLLEEVMSLKGAIDQGEPSEPLQSEPVSAEPVAQAPAVEERKPAEKKIVKPKWLKM* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1917 243 Gene3D - 91 173 - -
Psa1g1917 243 ProSiteProfiles UBX domain profile. 97 173 IPR001012 GO:0005515
Psa1g1917 243 CDD UBX2_UBXN9 102 175 - -
Psa1g1917 243 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1-RELATED 30 243 - -
Psa1g1917 243 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 30 243 IPR044232 GO:0032984|GO:0051117
Psa1g1917 243 MobiDBLite consensus disorder prediction 200 243 - -
Psa1g1917 243 Pfam UBX domain 99 167 IPR001012 GO:0005515
Psa1g1917 243 SUPERFAMILY Ubiquitin-like 77 173 IPR029071 -
Psa1g1917 243 MobiDBLite consensus disorder prediction 226 243 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1917 30 122 C2H2 Transcription Factor Family AT2G01650 31.959 4.35e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1917 K15627 - gmx:100792947 321.242