Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1909 GAATTACCATTGATATTGCTTTATGGAAATTTGAAACCACCAAGTACTACTGTATAATCATTGATGCTCCTGGACATCGTGATTTTATTAAGAAGATAATTACTGGTACCCCTCAGGCTGATTGTGTCGTCCTTATCATTGATTCTACCAATGGTGGTTTTGAGGTTGTTATCTCCAAGGATAGACAAACTCATGAGCATGCTCTTTTTGCTTTTACTCTTGGAGTGAAGCAG 233 0.3777 ITIDIALWKFETTKYYCIIIDAPGHRDFIKKIITGTPQADCVVLIIDSTNGGFEVVISKDRQTHEHALFAFTLGVKQ 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1909 77 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 76 IPR027417 -
Psa1g1909 77 Gene3D - 1 77 IPR027417 -
Psa1g1909 77 PANTHER TRANSLATION FACTOR 1 77 - -
Psa1g1909 77 PRINTS GTP-binding elongation factor signature 18 28 IPR000795 GO:0003924|GO:0005525
Psa1g1909 77 PRINTS GTP-binding elongation factor signature 34 45 IPR000795 GO:0003924|GO:0005525
Psa1g1909 77 PANTHER ELONGATION FACTOR 1-ALPHA 1-RELATED 1 77 - -
Psa1g1909 77 Pfam Elongation factor Tu GTP binding domain 1 76 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1909 Psa-Chr1 137411982 137412214 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1909 1 77 Eukaryotic Initiation Factors Gene Family AT5G60390 84.416 6.65e-42 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1909 K03231 - ming:122057884 135.961