Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1908 ATGCCGACGGTAGCCGTGAAACTCTACAGCGTGTTCTTCAAGTTTCTGTTAAAACACCGTTTACAAAATCGGATCCAAACTCCGACCGAAGTATCCGACCCGTTTGGTATAACTTCCCGACCCGACGAATCTATAGCTTCGCCGAATCCTTCTTTTACCGACGGCGTCGCCACCAAGGATATCCACATCGATTCGAATCTTTCTCTTTCGGTTCGGATCTTTCTCCCTGAATCTGCATTGTTAAATCCCGAACCTAATTCCAAACCTAAACGAAAACACGAACCTAAGGGACGTGAAACGACGTCGTCGCCGAGGGTTAATACAAGGAGGAACAGTTACGGTGTGACTGGTGCTCTCGTGAAGGAGGAGGTGAGAAGGAATAGTGTCGGCAGTGATGCGGAGGGTTTGAATTTGGATTTGAATTTGATTTCTGGTGGTGGATATGGTGGTTATTCGCCGACCATTGATGATCGGAAGAGGAAGTTACCGGTGATGGTGCAGTTTCATGGAGGTGGTTGGGTGAGTGGGAGTAATGATTCGGTGGCGAATGATTATTTTTGTAGGAGGATTGCAAAGCTTTGTGATGCGTTGGTTGTTGCTGTTGGTTATCGGCTTGCGCCGGAGAGTCGGTATCCGGCGGCTTTTGAGGATGGATTTAAGGTTTTGGGTTGGTTAGGGAAACAAGCGAATTTGGCGGAGTGTAGTAAGTCGTTGGGGATTAAGAAATTGGATGGTGGTCATAGGCATATCGTTGATTCTTTTGGAGCTTCTATGGTTGAACCTTGGTTGGCTGCACATGGAAATCTATCAAGGTGTGTGCTTATTGGTGTGAGTTGTGGAGCAAATATTGCAAACTATGTAGCTCAAAAAGCTGTAGAAACAGGCAAACTTCTGGACCCTGTCAAAGTGGTGGCACAGATACTGATGTATCCGTTTTTTGTTGGAAGTGTGCCCACGCATTCTGAAATAAAATTGGCAAACTCTTATTTTTACGACAAAGCTATGTGTATGCTGGCATGGAAACTATTCCTACCCGAGAAAGAATTTAGCCTAGACCATCCAGCCGCCAATCCCCTAGTCCCAGGCCATGGTCCTCCTTTAAAGCAGATGCCTCCAACATTAACAGTAGTGGCGGAACATGACTGGATGAGAGACCGTGCCATAGCTTACTCAGAGGAGCTTAGGAAGGTGAATGTCGATGCACCTGTTCTTGAATATAAAGATGCAGTTCATGAATTTGCTACACTAGACGTACTTCTCAGAAGCCCTCAGGCTCAAGTTTGTGCTGAGGACATTGCCATCTGGGTCAAGAAGTACATTTCACTTCGAGGGCATGAATTCTCATATTGA 1350 0.4607 MPTVAVKLYSVFFKFLLKHRLQNRIQTPTEVSDPFGITSRPDESIASPNPSFTDGVATKDIHIDSNLSLSVRIFLPESALLNPEPNSKPKRKHEPKGRETTSSPRVNTRRNSYGVTGALVKEEVRRNSVGSDAEGLNLDLNLISGGGYGGYSPTIDDRKRKLPVMVQFHGGGWVSGSNDSVANDYFCRRIAKLCDALVVAVGYRLAPESRYPAAFEDGFKVLGWLGKQANLAECSKSLGIKKLDGGHRHIVDSFGASMVEPWLAAHGNLSRCVLIGVSCGANIANYVAQKAVETGKLLDPVKVVAQILMYPFFVGSVPTHSEIKLANSYFYDKAMCMLAWKLFLPEKEFSLDHPAANPLVPGHGPPLKQMPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDVLLRSPQAQVCAEDIAIWVKKYISLRGHEFSY* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1908 449 Gene3D alpha/beta hydrolase 36 444 IPR029058 -
Psa1g1908 449 Pfam alpha/beta hydrolase fold 165 414 IPR013094 GO:0016787
Psa1g1908 449 PANTHER CARBOXYLESTERASE 16-RELATED 21 429 - -
Psa1g1908 449 PANTHER ARYLACETAMIDE DEACETYLASE 21 429 - -
Psa1g1908 449 MobiDBLite consensus disorder prediction 86 100 - -
Psa1g1908 449 MobiDBLite consensus disorder prediction 80 110 - -
Psa1g1908 449 SUPERFAMILY alpha/beta-Hydrolases 44 440 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1908 Psa-Chr1 137363208 137368560 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1908 1 449 Carbohydrate Esterase AT3G27320 70.153 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1908 - - gmx:100809142 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g1908 1 137363208 137368560 Psa1g1908 1 137363208 137368560 ECH