Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1892 ATGGCTTCTTTTAATTTCTCTTTGAATTCCACAACCCTACTTGTGCTTCTCTTGGCTTTTTTCTCTTGTCTACAAATTTCAATTGTAGCTTCTCATGAATTTCAAGTTGGTGACCTAAAAGGTTGGGTTGTTCCACCTTCCAATGACACTGATATCTACAATATTTGGGCTTCTAACTTTAGGTTCCAAATTGGCGACTCCATAATTTTCAAATACAAGAAGGATTCAGTGATGGAAGTTGGAAAAGAAAACTACAATGATTGCAATGCAACACAACCAACATTTTTCTCAAACAATGGTGACACAGAGTTCAAGTTTGGTCATTCAGGAACATTCTACTTCATAAGTGGTGCATCAGGACATTGTGAGAAAGGACAAAAAATGATTGTGAGAGTCATGATTCAGGATCTTCATTCCAAATCTTCTGCATACCATGTTCCTGTTTTTCCAATTGGTGTCTTTGTTTTTGCATTTGTTGTTTCCTATGTAATTTGA 495 0.3596 MASFNFSLNSTTLLVLLLAFFSCLQISIVASHEFQVGDLKGWVVPPSNDTDIYNIWASNFRFQIGDSIIFKYKKDSVMEVGKENYNDCNATQPTFFSNNGDTEFKFGHSGTFYFISGASGHCEKGQKMIVRVMIQDLHSKSSAYHVPVFPIGVFVFAFVVSYVI* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1892 164 Pfam Plastocyanin-like domain 51 126 IPR003245 GO:0009055
Psa1g1892 164 ProSiteProfiles Phytocyanin domain profile. 32 134 IPR003245 GO:0009055
Psa1g1892 164 Gene3D - 30 137 IPR008972 -
Psa1g1892 164 PANTHER EARLY NODULIN-LIKE PROTEIN 21 13 135 - -
Psa1g1892 164 PANTHER BLUE COPPER PROTEIN 13 135 IPR039391 GO:0009055
Psa1g1892 164 SUPERFAMILY Cupredoxins 31 133 IPR008972 -
Psa1g1892 164 CDD OsENODL1_like 32 133 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1892 Psa-Chr1 135929718 135930630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1892 29 163 Phytocyanin Superfamily AT5G14345 51.852 7.40e-45 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1892 - - lang:109346935 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g1892 1 135929718 135930630 Psa1g1892 1 135929718 135930630 ECH