Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa1g1859 | ATGGTGATGGCTGCTGCGATGCAACGCGAAGGGAAGCGTTTGGCTCCTTTCATGTCTTCCCAACCAAAATCAACAACACTCTCTGATCCACCCTCATCTCTCCCTGTTCAAACTAGGGCTGAAAATTCATGTGGCTTGTGGCAGCCATTTACAGCTCTTCTCGGCGATGCTATAAGTGTTGATGTCAAGAAGAATGTTGTTATTACCATTTCTTCATATAAAGGTCTTTGTGGTGGAATCAACTCCACCTCTGTAAAGATAAGCAGAGTGTTGAGCAAGTTGAATTCTGAACCTGATAAAGAGACCAAGTACGTCATATTGGGAGAGAAGGCTAAGGCTCAGTTGATTTGTGACTCAAAGAAAGACGTTGCACTCAGCTTGACTGACCTACAAAAGAATCCTCTGAATTATACTCAGGTGTCTGTCTTGGCTGATGACATTTTAAAGAATGTGGGATATGATGCACTTAGGATTGTTTTCAATAAGTTTCAGTCGGTTGTGCAATTTATACCAACAGTGTCAACTGTACTGTCCCCTGAGATTGTTGAAAGAGAGGCTGAAGCTGGTGGAACACTCGGTGAACTGGATTCCTATGAGATTGAAGGGGGTGAGACAAAATCAGAAGTTCTCCAAAATCTGTCAGAGTTCCAGTTTTCTTATGTCATGTCCAATGTAGTGCTAGATAATGCCTGCAGTGAGCAAGGAGCAAGGATGTCTGCCATGGATAGCTCTAGCAGGAATGCTAGGGATATGCTTGATCGTCTGACCCTCACTGATAACAGAACTCGTCAAGCATCAATCACCACCAAATTGATTGAGATTATCTCTGGAGCATCAGCACTGACTG | 847 | 0.4345 | MVMAAAMQREGKRLAPFMSSQPKSTTLSDPPSSLPVQTRAENSCGLWQPFTALLGDAISVDVKKNVVITISSYKGLCGGINSTSVKISRVLSKLNSEPDKETKYVILGEKAKAQLICDSKKDVALSLTDLQKNPLNYTQVSVLADDILKNVGYDALRIVFNKFQSVVQFIPTVSTVLSPEIVEREAEAGGTLGELDSYEIEGGETKSEVLQNLSEFQFSYVMSNVVLDNACSEQGARMSAMDSSSRNARDMLDRLTLTDNRTRQASITTKLIEIISGASALT | 282 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa1g1859 | 282 | TIGRFAM | ATPsyn_F1gamma: ATP synthase F1, gamma subunit | 59 | 281 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Psa1g1859 | 282 | MobiDBLite | consensus disorder prediction | 8 | 34 | - | - | |
Psa1g1859 | 282 | MobiDBLite | consensus disorder prediction | 18 | 34 | - | - | |
Psa1g1859 | 282 | CDD | F1-ATPase_gamma | 37 | 278 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Psa1g1859 | 282 | PANTHER | BNAA05G10580D PROTEIN | 36 | 281 | - | - | |
Psa1g1859 | 282 | Pfam | ATP synthase | 56 | 281 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Psa1g1859 | 282 | PRINTS | ATP synthase gamma subunit signature | 62 | 81 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Psa1g1859 | 282 | PRINTS | ATP synthase gamma subunit signature | 154 | 171 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Psa1g1859 | 282 | PRINTS | ATP synthase gamma subunit signature | 228 | 247 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Psa1g1859 | 282 | PRINTS | ATP synthase gamma subunit signature | 259 | 280 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Psa1g1859 | 282 | PANTHER | ATP SYNTHASE GAMMA CHAIN | 36 | 281 | IPR000131 | GO:0015986|GO:0045261|GO:0046933 | |
Psa1g1859 | 282 | Gene3D | - | 58 | 184 | - | - | |
Psa1g1859 | 282 | Gene3D | ATP synthase, gamma subunit, helix hairpin domain | 185 | 281 | - | - | |
Psa1g1859 | 282 | SUPERFAMILY | ATP synthase (F1-ATPase), gamma subunit | 59 | 281 | IPR035968 | GO:0015986|GO:0045261|GO:0046933 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa1g1859 | Psa-Chr1 | 133849908 | 133850885 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa1g1859 | 62 | 281 | Primary Pumps ATPases | AT1G15700 | 25.100 | 2.54e-12 | 64.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa1g1859 | K02136 | - | gmx:100813657 | 412.535 |