Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1836 ATGGCTATTTCTACCACTACTCGTCATTTGTTCACTCTTTTTGTGTTCTTCTGCTTTGCTCTTCGCTTTATTTCTGCTGAAGTTCGTATTGCGGCTGCCATATGTTATAGGCCAAGTGGAACATGGTCTGGACCTTGTGTCGGCTCTAGTATATGCAATGATCAGTGCAGAGAGAGAGAGAACGCTGTCGGTGGAGGCTGCAATGTTTTGGCTTGTATCTGTCATTATTTATGTCGGTAA 240 0.4375 MAISTTTRHLFTLFVFFCFALRFISAEVRIAAAICYRPSGTWSGPCVGSSICNDQCRERENAVGGGCNVLACICHYLCR* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1836 79 SUPERFAMILY Scorpion toxin-like 34 78 IPR036574 -
Psa1g1836 79 ProSitePatterns Gamma-thionins family signature. 33 56 IPR008176 GO:0006952
Psa1g1836 79 Gene3D - 30 78 IPR036574 -
Psa1g1836 79 Pfam Gamma-thionin family 34 78 - -
Psa1g1836 79 PANTHER DEFENSIN-LIKE PROTEIN 1 6 78 - -
Psa1g1836 79 SMART gth_4 34 78 IPR003614 GO:0006952
Psa1g1836 79 PANTHER DEFENSIN-LIKE PROTEIN 18-RELATED 6 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1836 Psa-Chr1 132661640 132662471 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1836 4 78 Plant Defensins Gene Families AT5G44430 36.709 2.12e-09 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1836 - K08023 mtr:MTR_8g059405 97.0561