Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1818 ATGAAAAATGATGGATGTTGTCTCAACTCAGCCCTAGTTGATAGATCATGTAAAGCAGAAAAACCGGAGATTGAGCTTGATAATGGTAACGTTTATAAACCGGAGAGTTGTTGGGAAGATATATGTCATACTATAACAGAAGCTCATCACATGGTTTATTTAGTCGGTTGGTCAATTTACCATAAAGTGAGGCTTGTTAGGGAACCTTCTAGACCTCTTCCGTGGGGTGGGGATTTAACACTTGGTGAGTTACTCAAGTATAAGTTTGAAGAAGGGGTGAGAATTGTATCGCTTGTTTGGGATGTTAAAGCTTCCCATGATAAGGTTTTCTTCAAGTCAACTGGAATAATGATGACTCATGATGAGGAAACAAAGAAGTTTTTCAAACATTCTTCTGTCATGTGTGTTTTGGCGCCTCGCTATGCTAGCAGTAAGATAAGCTCCCTTAAACAACAGGTTGTTGGAACTGTCTTCACACACCACCAAAATGTGTTATTGTGGACACACAGGCTTCTGGCTGGCGCAAGCTTTGTGGCCGAGCTTATAGGCGGAAATTTAGACATGGCTGGCAAGCTTCAAGGAGAAGCTCTTATGCACAAGACATATGCTGCTCGTCTTATGGGTGGAGAGGCATCGGCTCCATTCTGCTTGAACTACCTTTCCATTTCCAAAAAAATAACTAGGCAGCGCACAAGTTCAAAACCAATCCACAACCAAGGAAGCATACCTTGTGGTGAGCAAATACGGCCTGGGCGGTCTTCTGCAGATGTTGCTGGTAGCAATAGTTCAAAATGGGCTTATTCAGAAGGAAGTGATAAATTAAGACCTGCTACAGAATATTCATCAAAGGAACATTTTCCTGGAGAAAGATGTTCAAATGAGGAAGATGCTATGATAAAAAAAACCATAAAATGTTGGACACTTTCTGTTTTGCAGAATGGCTACCGTTGGTTTGCAAGAGCTTATCATTTGCGAGGCCTTTCGTTCCATGCAATGGGAGAGCATAGGAAAGCTATCAAAGATTTGACAATGGGGTTGAATATCGATGGTGTCAACATTGAGTCCTTATATTTACGAGCTGCATGCTACCATGCTGTCGGACAATACAAAGGCGATCAAGGATTATGA 1128 0.4167 MKNDGCCLNSALVDRSCKAEKPEIELDNGNVYKPESCWEDICHTITEAHHMVYLVGWSIYHKVRLVREPSRPLPWGGDLTLGELLKYKFEEGVRIVSLVWDVKASHDKVFFKSTGIMMTHDEETKKFFKHSSVMCVLAPRYASSKISSLKQQVVGTVFTHHQNVLLWTHRLLAGASFVAELIGGNLDMAGKLQGEALMHKTYAARLMGGEASAPFCLNYLSISKKITRQRTSSKPIHNQGSIPCGEQIRPGRSSADVAGSNSSKWAYSEGSDKLRPATEYSSKEHFPGERCSNEEDAMIKKTIKCWTLSVLQNGYRWFARAYHLRGLSFHAMGEHRKAIKDLTMGLNIDGVNIESLYLRAACYHAVGQYKGDQGL* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1818 375 Gene3D Tetratricopeptide repeat domain 273 371 IPR011990 GO:0005515
Psa1g1818 375 SUPERFAMILY TPR-like 317 370 IPR011990 GO:0005515
Psa1g1818 375 MobiDBLite consensus disorder prediction 230 261 - -
Psa1g1818 375 PANTHER PHOSPHOLIPASE D DELTA 19 184 - -
Psa1g1818 375 SUPERFAMILY Phospholipase D/nuclease 33 152 - -
Psa1g1818 375 SMART tpr_5 319 352 IPR019734 GO:0005515
Psa1g1818 375 PANTHER PHOSPHOLIPASE D 19 184 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1818 Psa-Chr1 130172835 130176428 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1818 22 188 Phospholipase D Gene Family (Wang group) AT4G35790 61.078 9.33e-63 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1818 K01115 - gmx:100801787 253.062