Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1816 ATGGATTTTGTTCTAAGTTTTCAAAATATCACAACAATAGTATTTCTCTCTCTACTATTCATACTTTCTTTTTTCCATTTTCGTCCTTCCAAAGTTCTTAATAAGGGTAAAGGACCTCCCATGGCTTCAGGTGCATGGCCTATACTAGGTCATCTCTTAGTATTAGCTAGTTCTAAAACACCACATAAAACATTAGGCGCCATGGCTAACAGATATGGACCCTTATTCACCATAAAACTTGGTACAAAACATGCTTTGGTTCTAAGCAATTGGGAAATGGCAAAAGAATGTTACACTATAAACGACGTTGTTGTTTCGTCTCGTTCGAAACTCGTTGCGATTGAACATATAGCTTATAATCAAGCTAGTTTTGGTTTTGCGCCGTATGGTCCTTATTGGCGCGAAATGCGCAAAATTGTTAGTATGTTTCTTTCGAATCGTCGAATGGAACAACTAAGTCATGTTCGAGTTATAGAAGTTAAAGCTTCAATTAAAGAGCTTTTTCATATTTGGTCTAGCACAAAAAATGATTCTGGATACTTGTTGGTGGAAATGAAGCAATGGTTCACCAAGTTGATATTCAATATAGTTTTCCAAACTATGGCTGGGAAGAGATATTTTGGTGACACAGCAGTGGTAGAAGAGAAAGAAGCACAAAAAGTTGTAGAGGCTTTGAGGAAATTCATGCATATGTTAGGAGTATGTACAATGGCTGATGCTATTCCAATTCTAAGATGGATGAAATTAGGAGTGAAAGCAATGAAAGAAACTGCCAAAGAATTAGACATAGTTTTAGATGATTGGTTAGTGGAACATCATAAGATGAAGTGTTTGGTTGAAAAGGTTGAAAAAGACCAAGATTTTATGGACATGATGATTTCAGTGCTTGATGGTGCCACAATCAATGGGTTTGATGCTGATACTATAAACAAAGCAACAACATTGGCATTAATATTGGGAGCAACTGATACAAGCACAGTTACCCTAACATGGGTAATATGTTTATTGTTGAAAAATCCTATTGCATTAAAAAAAGTGAAAGAAGAACTCAACATTCAAATTGGAGAAGAAAGATTCATAAATGAATCAGACATAAAGAATTTGGTATATCTTCAAGCAATAGTCAAAGAGACGCTAAGGTTATATCCTCCTGGTCCTCTCTCTGCGCCTCGCGAGTTCACAGAAGATTGTATTTTAGGTGGTTATCATATAAAAAAAGGAACCCGATTAATCACCAACCTTTGGAAAATTCATACTGATCCAAGTGTTTGGCCAGATCCGTTGGAGTTTAGACCAGAACGGTTTCTTACTACTCATAAAGATGTTGATGTTAAGGGTCAAGATTTTGAGTTGTTGCCATTTGGGAGTGGTAGAAGGATATGTCCAGGAATATCTTTTGGTCTTCATATGATTCATTTAACCTTGGCTAATTTTTTACACTCATTTGAAATCTCAAATGGATCTAGTGAACCTGTTGATATGAGTGAAGTTCTAGGAATGACCAATGAAAAAGCTACACCACTTGAGATTAAGGTTAAACCATATTTTTCTACTAAGTATTATGAAACATTGTGA 1575 0.3575 MDFVLSFQNITTIVFLSLLFILSFFHFRPSKVLNKGKGPPMASGAWPILGHLLVLASSKTPHKTLGAMANRYGPLFTIKLGTKHALVLSNWEMAKECYTINDVVVSSRSKLVAIEHIAYNQASFGFAPYGPYWREMRKIVSMFLSNRRMEQLSHVRVIEVKASIKELFHIWSSTKNDSGYLLVEMKQWFTKLIFNIVFQTMAGKRYFGDTAVVEEKEAQKVVEALRKFMHMLGVCTMADAIPILRWMKLGVKAMKETAKELDIVLDDWLVEHHKMKCLVEKVEKDQDFMDMMISVLDGATINGFDADTINKATTLALILGATDTSTVTLTWVICLLLKNPIALKKVKEELNIQIGEERFINESDIKNLVYLQAIVKETLRLYPPGPLSAPREFTEDCILGGYHIKKGTRLITNLWKIHTDPSVWPDPLEFRPERFLTTHKDVDVKGQDFELLPFGSGRRICPGISFGLHMIHLTLANFLHSFEISNGSSEPVDMSEVLGMTNEKATPLEIKVKPYFSTKYYETL* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1816 524 PANTHER CYTOCHROME P450 82C3-RELATED 1 523 - -
Psa1g1816 524 Pfam Cytochrome P450 41 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1816 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Psa1g1816 524 PANTHER CYTOCHROME P450 82A3 1 523 - -
Psa1g1816 524 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1816 524 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1816 524 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1816 524 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1816 524 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1816 524 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1816 524 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1816 524 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1816 524 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1816 524 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1816 524 Gene3D Cytochrome P450 28 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1816 524 SUPERFAMILY Cytochrome P450 45 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1816 Psa-Chr1 130120631 130122722 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1816 40 514 Cytochrome P450 AT4G31940 47.629 4.28e-166 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1816 - - gmx:100805047 666.766