Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1813 ATGGATTTTGTCCTAAACTACCTTAACACCACTACCATAGCATTCATTTCTCTAATTTCCCTCCTTTTCTTTCTATTTCGTTTCTCCAAAGTTTCTCATACTAAAGAACCTCCTATCATTTCAGGGTCATGGCCATTACTAGGTCACCTTCCTTTAATGAGAAATACACAAACACCCCATAAAACCTTAGGTGCTTTAGTTGATAAATATGGACCTATATTCACAATCAAACTAGGTGCTACAAATGCTTTGGTACTTAGTAATTGGGAATTAGCCAAAGAATGTTTTACCAAAAACGACATAGTCGTTTCGTCGCGCCCTAAGCCTGTCGCGGTTGAGCTTATGTCGTATAATCAAGCTTTCATTGGTTGGGCACCATATGGTACATATTGGCGTCAATTAAGGAAAATTGTCACCCTAGAGATTCTCTCTAATCGAAGAATTGAACTACTGAGTCATATTCGTGTCTCTGAAGTTCAAACATCGATTAAAGAACTTGTTAATGTTTGGTCAAATCAAGTGTCACCACAATATGGATTGCTCGGTGACACTAAGTCGTCTAGTACTAATGATGAGCCTAGTACATATGTGTCGGTCGAGTTGAAGAAGTGGTTTGCACAATTGACATTAAACATGGTCCTAAGAATGGTGGTTGGAAAGAGATGTTTTGGCGATGTGGATGTGGAAAATAAGGAAGAAGCAAAGAAATTTTTGGAAAATATAAGAGATTTTATGCGTTTGATTGGAACATTTACGGTGGGAGATGGTGTACCATTTTTAAAGTGGTTGGATTTAGGAGGGCATGAAAAGGAAATGAAGAAATGTGCAAAGAAATTTGATGAAATGTTAAATGAGTGGTTGGAAGAGCATCGTGGAAAGAAGGGTTTAGGTAGTGAAGATAAGGTTGTGGGGGAAAGAGATTTCATGGATGCAATGCTTTTGGTGCTTAAAGACAAACCAATTGAGGGGTTTGATGTAGATACCATAATCAAAGCAACAACATTGGAGTTGATTCTAGGAGGAAGTGACACAACCGCAGGAACACTTACATGGGCGATGTGTCTTCTTTTAAAACATCCTCATGTCTTAGAAAAATTAAAAGAAGAACTTAACACATATATTGGAAAAGAAAGATGTGTGAATGAGTCAGATATCAATAAATTAGTATATCTTCATGCTATAATAAAAGAGACGTTGAGATTATATCCACCAGCTCCGTTTTCATCACCTCGCGAATTCACAGAAGATTGCACAATAGGTGGATATCATATAAAAAAAGGAACTCGATTGATGCCGAATTTATGGAAGATCCATAGAGATCCTAGTGTTTGGCCCGATCCATTAGAGTTCAAACCCGAAAGGTTTCTTAGCACTCACAAAGATGTTGATGTTAGAGGTCAAAATTTTGAGTTGTTGCCATTTGGAAGTGGGAGAAGAATGTGTGCTGGAATGTCCCTTGGTTTGCATATGGTTCACTATATTCTAGCTAATTTTTTGCATTCTTTTGAAATCTTGAATCCATCTCCGGAATCAATTGATGTGACTGAAGTTCTTGAATTTGTCACCACTAAAGCTACTCCACTTGAGGTTTTGGTTAAACCTTGTTTGTCTTTCAAATGTTATGAATCTATGTGA 1635 0.3737 MDFVLNYLNTTTIAFISLISLLFFLFRFSKVSHTKEPPIISGSWPLLGHLPLMRNTQTPHKTLGALVDKYGPIFTIKLGATNALVLSNWELAKECFTKNDIVVSSRPKPVAVELMSYNQAFIGWAPYGTYWRQLRKIVTLEILSNRRIELLSHIRVSEVQTSIKELVNVWSNQVSPQYGLLGDTKSSSTNDEPSTYVSVELKKWFAQLTLNMVLRMVVGKRCFGDVDVENKEEAKKFLENIRDFMRLIGTFTVGDGVPFLKWLDLGGHEKEMKKCAKKFDEMLNEWLEEHRGKKGLGSEDKVVGERDFMDAMLLVLKDKPIEGFDVDTIIKATTLELILGGSDTTAGTLTWAMCLLLKHPHVLEKLKEELNTYIGKERCVNESDINKLVYLHAIIKETLRLYPPAPFSSPREFTEDCTIGGYHIKKGTRLMPNLWKIHRDPSVWPDPLEFKPERFLSTHKDVDVRGQNFELLPFGSGRRMCAGMSLGLHMVHYILANFLHSFEILNPSPESIDVTEVLEFVTTKATPLEVLVKPCLSFKCYESM* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1813 544 Gene3D Cytochrome P450 25 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1813 544 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 474 483 IPR017972 GO:0005506|GO:0016705
Psa1g1813 544 SUPERFAMILY Cytochrome P450 43 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1813 544 PANTHER CYTOCHROME P450 82C3-RELATED 1 543 - -
Psa1g1813 544 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1813 544 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1813 544 PRINTS E-class P450 group I signature 329 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1813 544 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1813 544 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1813 544 PRINTS E-class P450 group I signature 433 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1813 544 PRINTS E-class P450 group I signature 471 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1813 544 PRINTS E-class P450 group I signature 481 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1813 544 PRINTS P450 superfamily signature 340 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1813 544 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1813 544 PRINTS P450 superfamily signature 472 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1813 544 Pfam Cytochrome P450 43 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1813 544 PANTHER CYTOCHROME P450 82A3 1 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1813 Psa-Chr1 130061906 130064503 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1813 15 534 Cytochrome P450 AT4G31940 45.455 1.72e-162 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1813 - - gmx:100789386 711.064