Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1809 ATGGCGTCTGGTGGAACAGAAGCTTTCCCAGATTTGGGTAAACACTGTCAACTTCTCGATTGCCACCAGCTCGATTTCCTTCCCTTCACCTGTGATGGTTGCAAACAGGTATTCTGTATAGAACACAGATCATACAAGTCTCATGATTGTCCCAAACCAGACCACAACAGCCGAAAAGTAGTTGTTTGCGAAGAATGTTCCATGTCAATGGAGATAACAAACGATGTTGGAGAAAACGAAGAGACGATCTTAAAGAAACACCATAGTTCAGGAAAGTGTGACCCTAGCAAGAAGAAGAAACCGATTTGTCCCGTGAAGCGTTGCAAGGAGATTTTGACATTTTCGAACACGAGTACATGTAAAACTTGCAACATTAAAGTTTGTCTCAAGCATCGTTTTTCTGCTGATCATGCTTGTAGAAGAGGAGATTCAGCTTCTTCTTTAACTAGTGGTACTGGTAATGGAAGTTGGGAAAATAGGTTTATGGCTGCTTTAGCTTCAAGGAGTAATGGTCAAGATTGTGGCAAAAAAGCTGGATCTCGTTCTACTACTAATTCTCCTCCTAGTACTCCTTCTGTTAAAGCTTGTTGA 591 0.4146 MASGGTEAFPDLGKHCQLLDCHQLDFLPFTCDGCKQVFCIEHRSYKSHDCPKPDHNSRKVVVCEECSMSMEITNDVGENEETILKKHHSSGKCDPSKKKKPICPVKRCKEILTFSNTSTCKTCNIKVCLKHRFSADHACRRGDSASSLTSGTGNGSWENRFMAALASRSNGQDCGKKAGSRSTTNSPPSTPSVKAC* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1809 196 MobiDBLite consensus disorder prediction 168 196 - -
Psa1g1809 196 Gene3D - 2 67 IPR035896 -
Psa1g1809 196 ProSiteProfiles Zinc finger AN1-type profile. 10 58 IPR000058 GO:0008270
Psa1g1809 196 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 6 185 - -
Psa1g1809 196 SUPERFAMILY AN1-like Zinc finger 6 58 IPR035896 -
Psa1g1809 196 MobiDBLite consensus disorder prediction 173 196 - -
Psa1g1809 196 ProSiteProfiles Zinc finger AN1-type profile. 97 147 IPR000058 GO:0008270
Psa1g1809 196 Pfam AN1-like Zinc finger 103 140 IPR000058 GO:0008270
Psa1g1809 196 Pfam AN1-like Zinc finger 16 53 IPR000058 GO:0008270
Psa1g1809 196 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 6 185 - -
Psa1g1809 196 SMART AN1_Zf_4 16 55 IPR000058 GO:0008270
Psa1g1809 196 SMART AN1_Zf_4 103 144 IPR000058 GO:0008270
Psa1g1809 196 SUPERFAMILY AN1-like Zinc finger 95 140 IPR035896 -
Psa1g1809 196 Gene3D - 78 153 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1809 Psa-Chr1 129892215 129893563 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1809 1 170 C2H2 Transcription Factor Family AT3G28210 60.588 6.03e-71 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1809 - - aprc:113867149 311.227