Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1791 ATGTCTACAGGAACAACGGGATTTAAACGGATGAGAAAGCCTGAGGAGACGAAAATGAGAATAAAAAAACATGATTCTGGTGAAACTTTGTATCCCATGACTGCATTGCTAGTAGATGGTGTTGCTGCAAATAGACATTTGGAGCATCAAATACTTGAATCAATAGGAATTCAAACACAACCTGCCAATAATGCTCATCAAGCAATGCAACTTTTGTTGGATGGTGTTATTTTTGACATCATATTTGTTGATTTTGATTTGCCCATCATAAATGGACCTCAGTTTGTGATGGATATGCGTGCACTGGGGATACAAAGCAGAATAGTGGGCATGATATCAGACTTTACTGATCATAATTCACAAATGTTTTTGGAAGCAGGAGTCAATGGAAACACTCAAAAACCTTTGACTCGAGAACTTTTTGAACAGATCATTGAAATCCTTCGCTTCATATGA 456 0.3728 MSTGTTGFKRMRKPEETKMRIKKHDSGETLYPMTALLVDGVAANRHLEHQILESIGIQTQPANNAHQAMQLLLDGVIFDIIFVDFDLPIINGPQFVMDMRALGIQSRIVGMISDFTDHNSQMFLEAGVNGNTQKPLTRELFEQIIEILRFI* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1791 151 ProSiteProfiles Response regulatory domain profile. 34 149 IPR001789 GO:0000160
Psa1g1791 151 SUPERFAMILY CheY-like 32 146 IPR011006 -
Psa1g1791 151 PANTHER HISTIDINE KINASE RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 2 147 - -
Psa1g1791 151 SMART REC_2 33 145 IPR001789 GO:0000160
Psa1g1791 151 Gene3D - 10 148 - -
Psa1g1791 151 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 147 - -
Psa1g1791 151 Pfam Response regulator receiver domain 36 145 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1791 Psa-Chr1 128939093 128939980 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1791 1 138 Response Regulator Gene Family AT3G04280 31.429 1.04e-13 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa1g1791 Response_reg 2.6e-10 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1791 - K20974 cam:101509883 136.346