Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1765 ATGATTCACAAAACCATGTCTTCTTCACTGTTCTTGCCCTTCTTCACAATATTCACTTTCTGGGTATTTTTCACTTCATCCCAAGCTGAAGAAGACGACGTAAGATGTCTCCGAGGTATCAAAGATTCCCTAGGAAATTCCGAAAGTGGTATTTCATCATGGAGTTTCAACAACAACACCGTAGGTTTCATCTGTGATTTTGCTGGTGTCACTTGCTGGAACGTAAGAGAGAATCGAGTTTTGGGTTTGGAGCTAAAGGGTATGAAGCTTACAGGTAAGATCCCAGAATCTTTGAAGTATTGTGGACAAAATTTGCAAAAATTGGATCTTGGTTCAAATTCATTGAATTCAGTGATTCCAACACAGATCTGTAATTGGATGCCGTATTTGGTAACAATGGATTTATCTGGGAATGAACTTTCAGGTTCAATTCCAAACACTCTTGTGAATTGTTCTTATTTGAATGAGTTGATGTTATCTGATAATCATCTTAGTGGTAGAATACCTTATGAAATTGGTAGTTTAACTAGGCTTCATAAGTTTTCTGTTGCTAATAATCAACTTAGTGGGAGTATTCCATCGTTTTTCAATGGTTTTGATAAGGAAGATTTTGATGGGAATAGTGGTTTATGTGGTGGGCCGCTTGGTTCAAAGTGTGGTAGTATGAGTAAGAAGAATCTTGCTATTATTATTGCTGCTGGTGTTTTCGGTGCGGCGGGTTCTTTGTTGTTGGCTTTTGGGTTGTGGTGGTGGTATCATATTAGGTTGAGGAGGGAGAGGAGTAAGGAAGGGTATGTTGTTGGTGGGGTTGACGATTGGGCGTTGAGGTTGAGAGGTCATAAGCTTGCGCAAGTTAATCTTTTTCAGAAACCGATTGTTAAGGTTAAGCTTGGTGATTTGATGGCTGCGACGAATAATTTTAGTTCGGAGAATGTTTTGATTACGACGAGGACGGGTGCGACGTATAGGGCGGATTTACCGGATGGTTCGACGCTTGCGGTGAAGCGGTTGAGTACTTGTAAGATTGGTGAGAAGCAGTTTAGGATGGAGATGAATCGGTTGGGACAGCTTAGGCATCCGAATTTGGCGCCTTTGTTAGGGTATTGTGTTGTGGAAGAGGAGAAGCTTTTGGTTTATAAGCATATGTCGAACGGGACGCTTTATTCGTTGTTGCATAAGAATAGCGGCGCGTTGGATTGGTTGATGAGGTTTAGGATAGGGTTGGGTGCGGCAAGGGGACTTGCGTGGTTGCATCATGGTTGTCATCCTCCGATTATACAGCAGAATATTTGTTCTAATGTGATTCTTGTTGACGAAGAATTCGACGCTCGGATAATGGACTTTGGACTCGCGAGGCTTATGACGTCTGACTCAAACGGTAGTTTTGTGAACGGAGATTTGGGGGAGCTCGGTTATATCGCTCCTGAGTATTCGAGTACGATGGTTGCCTCGTTGAAAGGGGACGTGTATGGATTCGGAGTTTTGCTTTTGGAGTTGGTCACAGGGTGCAAGCCTCTCGAGGTGAACCGCGGCGATGAAGAATTTAAGGGTAACTTAGTGGATTGGGTGAATGTGCATTCTAGTTCAGGTAGACTCAAGGATTGCATCGATAAAGCGATATGTGGTAAAGGTAACGACGAAGAGATTCTGCAGTTTCTGAAAATCGCGTCCAATTGCATTGTAGCTCGCCCGAAAGATAGGTGGTCTATGTATCAAGTTTATCATTCATTGAAAACCATTTCCAAAGACAATAGTTTCTCCGAACAAGACGATGAATTTCCATTGATCTTCGGTAAGCCAGAAAATGAGCCGTCTTAG 1818 0.4252 MIHKTMSSSLFLPFFTIFTFWVFFTSSQAEEDDVRCLRGIKDSLGNSESGISSWSFNNNTVGFICDFAGVTCWNVRENRVLGLELKGMKLTGKIPESLKYCGQNLQKLDLGSNSLNSVIPTQICNWMPYLVTMDLSGNELSGSIPNTLVNCSYLNELMLSDNHLSGRIPYEIGSLTRLHKFSVANNQLSGSIPSFFNGFDKEDFDGNSGLCGGPLGSKCGSMSKKNLAIIIAAGVFGAAGSLLLAFGLWWWYHIRLRRERSKEGYVVGGVDDWALRLRGHKLAQVNLFQKPIVKVKLGDLMAATNNFSSENVLITTRTGATYRADLPDGSTLAVKRLSTCKIGEKQFRMEMNRLGQLRHPNLAPLLGYCVVEEEKLLVYKHMSNGTLYSLLHKNSGALDWLMRFRIGLGAARGLAWLHHGCHPPIIQQNICSNVILVDEEFDARIMDFGLARLMTSDSNGSFVNGDLGELGYIAPEYSSTMVASLKGDVYGFGVLLLELVTGCKPLEVNRGDEEFKGNLVDWVNVHSSSGRLKDCIDKAICGKGNDEEILQFLKIASNCIVARPKDRWSMYQVYHSLKTISKDNSFSEQDDEFPLIFGKPENEPS* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1765 605 Pfam Leucine rich repeat 104 164 IPR001611 GO:0005515
Psa1g1765 605 SUPERFAMILY L domain-like 32 205 - -
Psa1g1765 605 SUPERFAMILY Protein kinase-like (PK-like) 287 577 IPR011009 -
Psa1g1765 605 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Psa1g1765 605 Gene3D Ribonuclease Inhibitor 30 221 IPR032675 -
Psa1g1765 605 Gene3D Phosphorylase Kinase; domain 1 269 381 - -
Psa1g1765 605 Pfam Protein tyrosine and serine/threonine kinase 329 522 IPR001245 GO:0004672|GO:0006468
Psa1g1765 605 Gene3D Transferase(Phosphotransferase) domain 1 382 601 - -
Psa1g1765 605 PANTHER - 14 598 - -
Psa1g1765 605 PANTHER OS07G0107800 PROTEIN-RELATED 14 598 - -
Psa1g1765 605 ProSiteProfiles Protein kinase domain profile. 307 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1765 Psa-Chr1 125533517 125536129 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1765 18 603 Receptor kinase-like Gene Family AT3G28450 64.141 0.0 776
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Psa1g1765 PK_Tyr_Ser-Thr 5.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1765 - - gmx:100810378 929.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g1765 1 125533517 125536129 Psa1g1765 1 125533517 125536129 ECH