Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1760 ATGCATAAATATTGCATCAGAAAGGTTGAGGTTTTTCAGTTACTTTTGGAGTATTTGAATGATTCGGGTTCTAAGGAGTGTAATCTTCCGTCTACGGTTTTGCTTTGTTTGAAGGAGTTTTATTTGTCGTTGTATAGGTCAAATATTCTTCTTGATTACTGCACGCAATCAAGAGATTCGACTCTTTTGGATGTTTTTCCTATTAAGGATATTGGTTTGAGTAAGGATGTTAGGGAGAAGGTTGAGCTTTTGTTGAAGCAATCGAGGAGGGCTAAGTTATTAATTGATATGGGAGATGATGCACTTAGGATTCGACTCTTTTCTGTTCTTGATGAGTTTAAGAATGGCAAAGTTCCGGAATCGGATGAATTACGAGGTGAAATAGAGGCTTTGGAGGAGCAGATTGTTAACCATGGGGGGGATATTGAGCCTACGATTACTGTGCTTAAAGGGTTGGTGGCGATGACTCGGTATTGTAGGTTTTTGATTTTTGGTTTTGAGGAAGATGAGCTTGATTTGGAAAATGGAAATCAGACGAAGCCGGAGATGGGTTTGATTACTCAAGAAATTGCTGAAACGTGTTTAACTGTTCTTAAGGACTTTTGTGGTATGATATCGTTGAATTTGATGAGAAACCCGGGGATTATTTTGACGGGTCAAACTTATGATTGA 672 0.3854 MHKYCIRKVEVFQLLLEYLNDSGSKECNLPSTVLLCLKEFYLSLYRSNILLDYCTQSRDSTLLDVFPIKDIGLSKDVREKVELLLKQSRRAKLLIDMGDDALRIRLFSVLDEFKNGKVPESDELRGEIEALEEQIVNHGGDIEPTITVLKGLVAMTRYCRFLIFGFEEDELDLENGNQTKPEMGLITQEIAETCLTVLKDFCGMISLNLMRNPGIILTGQTYD* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1760 223 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 17 60 223 - -
Psa1g1760 223 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 17 6 57 - -
Psa1g1760 223 PANTHER U BOX DOMAIN-CONTAINING 60 223 - -
Psa1g1760 223 PANTHER U BOX DOMAIN-CONTAINING 6 57 - -
Psa1g1760 223 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1760 Psa-Chr1 125355027 125356278 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1760 6 223 U-box Gene Family AT1G29340 49.259 3.62e-64 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1760 - - mtr:MTR_2g018010 306.99