Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1751 ATGAAGATGAAAAGATCAAGTTGTGTGTCTAGTGATGAAGATAACTATGAGATGAAAATGAATGAAATCCCCGTTCAAGAATTAAAGCACAAGTGCAATATTTGTGGCAAAGCATATAGCAACGGAAAAGCATTGGGTGGTCACCGAAGATCTCACTTTATTAAGAAGAAAGCTAATCATCATTCACAAAAGGTGAAAACTCCTCTCTCAATTCAAGTTAGTAATAATAGAGCTAATTGTTTCTTTGATAATGATAAGTATGGTGAAGAAGAAATTGATGAGAAAAAAAAATTTAGTTGTTATATTTGCGATAGGAAGTTTTGGACAAACAATGCTTTGTATGGTCATATGAGATCTCATCCCGATAGGGTTTTTAAAGGAGTTAGTCCGCCTTCTACAAATAATTCTAATTCATCTATTCTACAAAACAAAGAAGATGAGGATGATCAAGGTGACGATGATTGCTCTTTGCCGAGATGGCAAAAGAGAGATAAAAGAGGTAGAAAATGTATTGGCAGGGCAGAGGCGGCTGTCAATCTTCTACTTCTTCGATCTGATAAGTACTATTCTATTTTATCCAGTGATGAATCAAAAATTCCTGAATTCTTAGTTCCTTGTTATAAAGAAGAATTGAAAAAGCCTGAGATGAAAAAGATTAAAATCTTTATAGGATCTTCATCGAAGATTGGAAACAAAAATAATGAGAATGATAATGAGATAGTTGAATCCGACCATTCGAAGTTAAAGAAAGACAAAAGTTTATCTCAATCCAATGTTGAAGAAGAGAAAGAAAGTAACCATTATGAAGAACAACATATATTGGATTTTGATTTGAATGAGCCATATGTTATGGAGGATTAA 861 0.3298 MKMKRSSCVSSDEDNYEMKMNEIPVQELKHKCNICGKAYSNGKALGGHRRSHFIKKKANHHSQKVKTPLSIQVSNNRANCFFDNDKYGEEEIDEKKKFSCYICDRKFWTNNALYGHMRSHPDRVFKGVSPPSTNNSNSSILQNKEDEDDQGDDDCSLPRWQKRDKRGRKCIGRAEAAVNLLLLRSDKYYSILSSDESKIPEFLVPCYKEELKKPEMKKIKIFIGSSSKIGNKNNENDNEIVESDHSKLKKDKSLSQSNVEEEKESNHYEEQHILDFDLNEPYVMED* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1751 286 SMART c2h2final6 30 52 IPR013087 -
Psa1g1751 286 SMART c2h2final6 98 120 IPR013087 -
Psa1g1751 286 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 4 169 IPR044653 GO:0003700
Psa1g1751 286 ProSitePatterns Zinc finger C2H2 type domain signature. 100 120 IPR013087 -
Psa1g1751 286 ProSiteProfiles Zinc finger C2H2 type domain profile. 98 120 IPR013087 -
Psa1g1751 286 ProSitePatterns Zinc finger C2H2 type domain signature. 32 52 IPR013087 -
Psa1g1751 286 MobiDBLite consensus disorder prediction 129 158 - -
Psa1g1751 286 Pfam C2H2-type zinc finger 30 52 - -
Psa1g1751 286 Pfam C2H2-type zinc finger 98 122 - -
Psa1g1751 286 Gene3D Classic Zinc Finger 27 120 - -
Psa1g1751 286 MobiDBLite consensus disorder prediction 235 276 - -
Psa1g1751 286 MobiDBLite consensus disorder prediction 232 286 - -
Psa1g1751 286 SUPERFAMILY beta-beta-alpha zinc fingers 30 120 IPR036236 -
Psa1g1751 286 ProSiteProfiles Zinc finger C2H2 type domain profile. 30 57 IPR013087 -
Psa1g1751 286 PANTHER ZINC FINGER PROTEIN ZAT4-LIKE 4 169 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1751 24 134 C2H2 Transcription Factor Family AT2G26940 36.207 3.20e-14 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Psa1g1751 zf-C2H2_6 0.0068 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1751 - - cam:101497250 229.95