Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1734 ATGGATTTAGCGATAAGCAGCCTAATAAACACCACAGCAATTGCATTCCTAATTTTTCTAATTCCATTAGGTTTGATTCTACTTGGTCGTAGCAAGAAAAGAGAGGCGCCAATAGCCAAAGGTGCATGGCCAATACTTGGTCACCTCCCAATCTTTAATGGCACACAATCACCTCATAGAGTCTTAGGTGCCTTAGCTGATAAATATGGACCAATATTCACCATCAAACTTGGTTCTAAACATGCTTTAATCGTCAACAATTGGGAAATGGCAAAAGAATGTTTCACTACCAACGACATGGCTCTTTCATCTCGTCCCAATCTTGTTGCCACACAACATTTGGCCTATAAAGGAGCCATGTTTGGATTTGCACCATATGGTCCTTATTGGCGCAATCTTCGCAAGATTGCAACTCTAGAGATTCTCACAAATCGTCGAGTCAAACAACAACAACATATTCGTGTTTCCGAAGTACAAACATCGATTAAAGAGCTCTTCGATGTTTGGTATAGTAAAAATAGTGAGTTTGATTCATCAAACTATGTATTGGTGGATATGAAGCAATGGTTTACACACTTAACATTCAACATGGTTCTTCGAATGGTTGTTGGGAAGAGATATTTTGGTGCAAGAACTAATGTTGATGAAGAAGAAGCTCAAAGAACTGTGAAAGCTTTGAAGGATATGATGCATTTGTTTGGGGTCATCACTGTGGGAGATGTTATTCCTTGTTTGAAATTGTTTGATTTTGGTGGTCACGTGAAGGCAATGAAAGGAACTTTAAAGGAATTGGATGAAGTTTTAGGTGAGTGGTTGAAGGAGCGTCGCCATGAAAGGAGTTTGGGTGAAAAGGTTGATGGTGAAGATAAAGACATCATGGATGTGTTGCTTTCATTGCTTGATGGAAAAACTATTGAAGGGTTTGATTGTGATACAATAATCAAAGCCACAATATTGACAATATTTTCTGGAGGAACTGACACAAGTAGTGTTACCCTCATATGGGCACTATGTTTACTATTGAAAAATCCTCTTGCAATGAAAAAAGCTAAAGAAGAACTTGACACTCATATTGGTAAAGAAAGACATGTAAATGAATTAGATATAAGTAAGTTGTCATACATTCAAGCTGTAGTCAAAGAATCTTTAAGATTGTATCCCGCCGCACCTCTATCTGGACCTCACGAGTTCTCTATGGATTGTTCCGTAGCTGGTTATCATGTTAAAAAAGGAACTCGATTAATAACAAATCTTTGGAAGATCCACACAGATCCTAATGTTTGGCCAAATCCGTTAGAGTTTAAACCGGAAAGATTTCTTACTACTCATAAAGATGTTGATGTTAAAGGTAATCATTTTGAGTTATTACCATTTGGAAGTGGTAGAAGGATGTGTCCTGGAATATCTTTTGGACTTCAAATGGTGCATTATGCTCTAGCTAGCTTTTTACATTCATTTGATATCTTAAATCCAACAACATCTGAACTTGTTGATATGACTGGAAAGTTTGGATTAACAAATACTAAAGCTACTCCACTTGAAGTTCTTGTTAAACCATGTTTGTCTTTTAATTGTTATGAAATCATGTAA 1590 0.3686 MDLAISSLINTTAIAFLIFLIPLGLILLGRSKKREAPIAKGAWPILGHLPIFNGTQSPHRVLGALADKYGPIFTIKLGSKHALIVNNWEMAKECFTTNDMALSSRPNLVATQHLAYKGAMFGFAPYGPYWRNLRKIATLEILTNRRVKQQQHIRVSEVQTSIKELFDVWYSKNSEFDSSNYVLVDMKQWFTHLTFNMVLRMVVGKRYFGARTNVDEEEAQRTVKALKDMMHLFGVITVGDVIPCLKLFDFGGHVKAMKGTLKELDEVLGEWLKERRHERSLGEKVDGEDKDIMDVLLSLLDGKTIEGFDCDTIIKATILTIFSGGTDTSSVTLIWALCLLLKNPLAMKKAKEELDTHIGKERHVNELDISKLSYIQAVVKESLRLYPAAPLSGPHEFSMDCSVAGYHVKKGTRLITNLWKIHTDPNVWPNPLEFKPERFLTTHKDVDVKGNHFELLPFGSGRRMCPGISFGLQMVHYALASFLHSFDILNPTTSELVDMTGKFGLTNTKATPLEVLVKPCLSFNCYEIM* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1734 529 Gene3D Cytochrome P450 29 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1734 529 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1734 529 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1734 529 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1734 529 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1734 529 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1734 529 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1734 529 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1734 529 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1734 529 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1734 529 SUPERFAMILY Cytochrome P450 42 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1734 529 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1734 529 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1734 529 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1734 529 PANTHER CYTOCHROME P450 82A2 1 527 - -
Psa1g1734 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Psa1g1734 529 Pfam Cytochrome P450 42 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa1g1734 529 PANTHER CYTOCHROME P450 82C3-RELATED 1 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1734 Psa-Chr1 123532559 123536000 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1734 1 519 Cytochrome P450 AT4G31940 47.059 2.79e-171 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1734 - - gmx:100805047 699.123