Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1704 TATTATTCTCATCTAAAGCAATTCAGATATCATGAACTAATGTTAGCAACAAGAAATTTGAAACCAGAATTATTTCTTGGTGAGGGAGGATTTGGTAAGGTGTTCAAAGGTTGGATATGTCAAGATGAGAGGTCTCCTTCAAGACCCGGAGATAGAATGCCAATTGCTGTGAAGACTCTCAACAGAGAAGGAAAACAAGGCCACAAAGAATGGGTGGCTGAAATTAACCATCTCGGAGCTCTCCAACATCCAAATCTTGTAAAACTTATTGGTTATTGTATTGAAGATCAACATAGAATGCTTGTTTATGAGTACATGCCAAGAGGAAGCTTGGAAAATCATTTGTTTAAGAGACGAGCTACAACTCTCACTTGGGATGTGAGAATAAAAATTATGCTTGGTGCTGCGAAAGGCCTTGCATTTTTGCACGAGAAGGCTATAAAACCATTAATATATAGAGATTTCAAAACTTCTAACATTCTATTGGATTCGGAATACAATGCCAAACTTTCCGATTTTGGGCTTGCTAAAGATGCTCCGATAGGAGACAAGACTCATGTGACAACCCAAGTGATTGGCACGCAAGGTTATGCAGCTCCCGAGTATATAATGACAGGACATCTTAATTTCAAGAGTGATGTCTACAGTTTTGGTGTGGTTCTCCTTGAGATGTTAACCGGAAGAAAAGCAATTGACAAAAGAAGATCACAAAAAGAACAAAATTTAGTTAAATGGGCAAAACCACACTTAAAAAATCGAGGAGGGATTTATCACTTAATAGATCCAAACATTAAAGGTCAATATTCAACAAGATGTGCATATAAAGCTATGAAGATAGTCGCACATTGTATTTATGGTGATCCAAAACTAAGACCTTTAATGAGTGATGTTGTTAAAGAGCTCCAAATTATTTTTGATTACAATAATGATAGGTCTTCTTCACCATTACCTACACCACCATCATCGTTTAAGGGATTTCATGATGGTTCGTCCTCTTCTAATTTCTCTAGATATGGTAGAGGAGACGGTGGAAGTAAATATGGTCCCAAAGTTGGTTTGTCATCTTCAACTTCGTCTACAAAGAATACTCCATCTCAATTTAAAAATTCGCCATTGTACTTCACTCCTCCTTTTCCTTCCCCAAATCCTAAGTATAGTGGAAATGCATGA 1170 0.3709 YYSHLKQFRYHELMLATRNLKPELFLGEGGFGKVFKGWICQDERSPSRPGDRMPIAVKTLNREGKQGHKEWVAEINHLGALQHPNLVKLIGYCIEDQHRMLVYEYMPRGSLENHLFKRRATTLTWDVRIKIMLGAAKGLAFLHEKAIKPLIYRDFKTSNILLDSEYNAKLSDFGLAKDAPIGDKTHVTTQVIGTQGYAAPEYIMTGHLNFKSDVYSFGVVLLEMLTGRKAIDKRRSQKEQNLVKWAKPHLKNRGGIYHLIDPNIKGQYSTRCAYKAMKIVAHCIYGDPKLRPLMSDVVKELQIIFDYNNDRSSSPLPTPPSSFKGFHDGSSSSNFSRYGRGDGGSKYGPKVGLSSSTSSTKNTPSQFKNSPLYFTPPFPSPNPKYSGNA* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1704 389 CDD STKc_IRAK 26 304 - -
Psa1g1704 389 PANTHER OS01G0588500 PROTEIN-RELATED 3 341 - -
Psa1g1704 389 MobiDBLite consensus disorder prediction 350 373 - -
Psa1g1704 389 Gene3D Transferase(Phosphotransferase) domain 1 106 315 - -
Psa1g1704 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Psa1g1704 389 SUPERFAMILY Protein kinase-like (PK-like) 3 310 IPR011009 -
Psa1g1704 389 MobiDBLite consensus disorder prediction 346 389 - -
Psa1g1704 389 ProSiteProfiles Protein kinase domain profile. 20 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa1g1704 389 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 341 - -
Psa1g1704 389 Gene3D Phosphorylase Kinase; domain 1 4 105 - -
Psa1g1704 389 Pfam Protein tyrosine and serine/threonine kinase 26 301 IPR001245 GO:0004672|GO:0006468
Psa1g1704 389 ProSitePatterns Protein kinases ATP-binding region signature. 26 58 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1704 Psa-Chr1 119679097 119681436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1704 6 301 Glycoside Hydrolase AT3G07070 51.678 5.02e-103 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Psa1g1704 PK_Tyr_Ser-Thr 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1704 - - mtr:MTR_3g462840 547.74