Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1692 ATGGCCGCGTTCCACAATGTCTCTCTCTTCTTCATCATTGGTTGGAGGCAATCAAGCTTTCCCCATCCACTCAGGACTTTGGTGTGGGAAGAGTACAATGAGAAAGACAGTCACAAGAAGGTTTCTTCTGCTAGTCCATTCGTATGGAACCGGATCGTGCCAAATACTTGGGTCATTCTCCGTGAAGCTCCATCCTACCTCACCGGTGGAATCCCCGGTGACTACGGTTGGACACTGCTGGACTTTCCTCTGAATCCGGAGACCTTTTCCAAAAAACGTGAACTAGAGGTCATCACAGCAGGTGGGCTATGTTGGGAGCCTTGGGATGCGTCTTCCCGGAGCTCTTGGCTCGCAACGTGGAAGGTTACCGCATGCGGTGGACCTCTTGGTGAGGTGGTTGATCCATGTACCGTGGGAGCTTATGTCCAATTAGGCCTTGCCGAAGATCCAGAAGCATTTGCAGAGTTGAAGGTGAAAGAACTGAAGAATGGTAGGTTAGCGATGTTCTCAATGTTTGGATTCTTCGTTCAAGCTATTGTAACAGGAAAGGGGCCAATAGAAAATCTTGCTGACCACCTGGCTGATCCAGTTAACAACAATGCATGGGCATATGCCACAAACTTTGCCCCTGGAAAGTGA 639 0.4945 MAAFHNVSLFFIIGWRQSSFPHPLRTLVWEEYNEKDSHKKVSSASPFVWNRIVPNTWVILREAPSYLTGGIPGDYGWTLLDFPLNPETFSKKRELEVITAGGLCWEPWDASSRSSWLATWKVTACGGPLGEVVDPCTVGAYVQLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFAPGK* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1692 212 Pfam Chlorophyll A-B binding protein 142 178 IPR022796 -
Psa1g1692 212 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 38 99 - -
Psa1g1692 212 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 125 212 - -
Psa1g1692 212 Gene3D Chlorophyll a/b binding protein domain 108 205 - -
Psa1g1692 212 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 38 99 IPR001344 GO:0009765|GO:0016020
Psa1g1692 212 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 125 212 IPR001344 GO:0009765|GO:0016020
Psa1g1692 212 SUPERFAMILY Chlorophyll a-b binding protein 48 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1692 Psa-Chr1 118162061 118162844 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1692 64 212 Chloroplast and Mitochondria Gene Families AT2G05070 53.500 2.39e-53 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1692 K08912 - psom:113325252 200.675