Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1690 TTCCAGTGCTCTCTCCTTGCGAATGTCGGCGACTGACGGCGGTCTCCTCGCGAATGTCGGAGAACCACGGAAAACGACGGCGATCTCCTCGCGAATGTCGTAGAACCATGGAAAACGACGGCGATCTCTCTCGCTCAATCGTGTTTCTCTTGGGGCAAAGTTTGTGGCATATGCCCATGCATTGTTGTTCACTGGATCAGCCAGGTGTTCTTTCACCTTCAACTCTGCAAATGCTTCTGGATCTTCGGCAAGGCCTAATGGATCAAGAGTCTCATAGATATGGACCAGATCGTGCCAAATACTTGGGTCCATTCTCCGGTGAAGCTCCATCATACCTCACCGGTGAATTCCCCGGTGACTACGGTTGGACAACTGCTGGACTTTCTGCTGATCCAGAGACTTTTTTCCAAAAATCGTGA 419 0.5084 PVLSPCECRRLTAVSSRMSENHGKRRRSPRECRRTMENDGDLSRSIVFLLGQSLWHMPMHCCSLDQPGVLSPSTLQMLLDLRQGLMDQESHRYGPDRAKYLGPFSGEAPSYLTGEFPGDYGWTTAGLSADPETFFQKS* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1690 138 Gene3D Chlorophyll a/b binding protein domain 99 137 - -
Psa1g1690 138 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 88 135 - -
Psa1g1690 138 SUPERFAMILY Chlorophyll a-b binding protein 92 134 - -
Psa1g1690 138 MobiDBLite consensus disorder prediction 17 36 - -
Psa1g1690 138 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 88 135 IPR001344 GO:0009765|GO:0016020
Psa1g1690 138 MobiDBLite consensus disorder prediction 19 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1690 Psa-Chr1 118149340 118150478 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1690 93 134 Chloroplast and Mitochondria Gene Families AT1G29910 90.476 1.22e-21 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1690 K08912 - egr:104440810 95.1301