Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1688 ATGGCCGCTTCCACAATGTCTCTCTCTTCTTCATCATTGGTTGGGAAGGCAATTAAGCTTTCCCCATCCACTCAGGACTTTGGGGTGGGAAGAGTTTCAATGAGAAAAACAGTCAAAAAGAAGGTTTCTTCTGCTAGTCCATGGTATGGACCGGATCGTGCCAAATACTTGGGTCCATTCTCCGGCGAAGCTCCATCCTACCTCACTGGTGAATTCCCCGGTGACTACGGTTGGGACACTGCTGGACTTTCCGCTGATCCGGAGACCTTTTCCAAAAACCGTGAACTAGAGGTCATCCACAGCAGGTGGGCTATGTTGGGAGCCTTGGTGTGGTTCAAGGCAGGATCACAAATCTTCAGTGAGGGTGGACTTGACTACTTGGGTAACCCAAGCCTTGTCCACGCACAGAGCATTCTTGCGATATGGGCAACTCAAGTTATCTTAATGGGAGCTGTGGAAGGTTACCGCATTGCCGGTGGACCTCTTGGTGAGGTGGTTGATCCATTGTACCCGGGTGGTAGCTTTGATCCATTAGGCCTTGCCGAAGATCCAGAAGCATTTGCAGAGTTGAAGGTGAAAGAACTGAAGAATGGCAGGTTAGCGATGTTCTCAATGTTTGGATTCTTCGTTCAAGCTATTGTAACAGGAAAAGGGCCAATAGAAAATCTTGCTGACCACCTGGCTGATCCAGTGAACAACAATGCATGGGCATATGCCACAAACTTTGCTCCTGGAAAGTGA 741 0.4885 MAASTMSLSSSSLVGKAIKLSPSTQDFGVGRVSMRKTVKKKVSSASPWYGPDRAKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFAPGK* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1688 246 Pfam Chlorophyll A-B binding protein 64 212 IPR022796 -
Psa1g1688 246 Gene3D Chlorophyll a/b binding protein domain 55 239 - -
Psa1g1688 246 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 246 IPR001344 GO:0009765|GO:0016020
Psa1g1688 246 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 246 - -
Psa1g1688 246 SUPERFAMILY Chlorophyll a-b binding protein 47 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1688 Psa-Chr1 118120226 118121019 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1688 1 246 Chloroplast and Mitochondria Gene Families AT1G29930 80.899 2.48e-151 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1688 K08912 - gmx:100800351 447.973