Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1635 ATGTCACAGGTTGCATGGCAGGTTTCCATTGTCTTTATTCCTATGACAGTAATCAGCATATGCTATCAGAAATATTATATTCCATCAGGCCGGGAACTATCTCGTTTACTCGGAGTATGCAAAGCTCCTGTCATTCAGCACTTAGCCGGAACAATTTCAGGAATAAGCAAACATGACTTTACCACCAAGCAGCAGCAACAGCCTGCAAAACCAGTTGAAACAAACCATGGACAGTTAGAGGAACTGAGTTCACTACTGCAGAAAAATGGAAGCTTGAGCGCGGTAGAAACATTAGCATCTACTGCTATTTGTGGAGTTATCCACTCAATTATAGGTGGCCAGCCTTTGTTGATTTTAGGAGTTGCGGAACCTGCTGTTATAATGTATACTCATCTCTACAATTTCTGCAAAAATACACCTGATTTGGGGGCTGAGCTCTTTCTAGCTTGGGCTGGTTGGGTTTGTTTTTGGACGGCGTTCATGTTAATTTTGCTTGCAGCTTTTAATGCTTGCGATATTATCACTAGATTTACAAGAATTGCAGGGGATTTATTTGGCATGCTTATCACTGTTCTTTTCTTTCAAGAGGCTATAAAGGGACTGATAGATGAGTTCAGCAATCGCAAGGTTGAAGATCTTTCCTCGGTGCAAATTCAATGGCAGTATACAAATGGATTACTTGCAGTCATTTTCTCTCTAGAACTAGATCATCCTGCACATTAG 723 0.4094 MSQVAWQVSIVFIPMTVISICYQKYYIPSGRELSRLLGVCKAPVIQHLAGTISGISKHDFTTKQQQQPAKPVETNHGQLEELSSLLQKNGSLSAVETLASTAICGVIHSIIGGQPLLILGVAEPAVIMYTHLYNFCKNTPDLGAELFLAWAGWVCFWTAFMLILLAAFNACDIITRFTRIAGDLFGMLITVLFFQEAIKGLIDEFSNRKVEDLSSVQIQWQYTNGLLAVIFSLELDHPAH* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1635 240 PANTHER ANION EXCHANGE PROTEIN 87 235 IPR003020 GO:0005452|GO:0006820|GO:0016020
Psa1g1635 240 Pfam HCO3- transporter family 89 212 IPR011531 GO:0006820|GO:0016021
Psa1g1635 240 PANTHER BORON TRANSPORTER-LIKE PROTEIN 87 235 - -
Psa1g1635 240 SUPERFAMILY ABC transporter transmembrane region 2 56 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1635 Psa-Chr1 112762334 112763056 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1635 80 235 Antiporters AT5G25430 63.924 5.25e-61 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1635 K24194 - gmx:100787412 227.254