Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1629 ATGGAAGGCATCAATAAGCGACTCTTTAGTTCATCAATTTCACCAACAATGGTGTTTCTCTTTCTAGGTTTTGCTATTCTTCTCATGCTACCAATGGCATCAGCTTCAAGGATTTTGGTTGGTGGTAGCAAGGGTTGGAACACAAATTTCAACTACACTACTTGGGCTAAGGACAGGCATTTCTACAATGGTGATTGGCTTTTTTTTGTGTATGATAGGAACCAAATGAATGTACTAGAAGTAAACAAAACGGATTATGAAACATGCAACTCAGATCATCCACTTCACAACTGGACAACTGGAGCAGGAAGAGATGTCGTTCCATTGAATGTGACTCGACATTACTATTTCATAAGTGGCAAAGGATTTTGTTTTGGTGGAATGAAAATAGCTGTTCATGTTGAAAATCTACCTCCACCACCAAAAGCTTTACCTATAAAATCTTTTGCACCATCTCTTAAAGGCCATAACATCCTTCTCATGCCTATTGTTTTTGCTATTGGAGCAGCTTGGGATTCATTCATTTATTTATGGTAA 537 0.3799 MEGINKRLFSSSISPTMVFLFLGFAILLMLPMASASRILVGGSKGWNTNFNYTTWAKDRHFYNGDWLFFVYDRNQMNVLEVNKTDYETCNSDHPLHNWTTGAGRDVVPLNVTRHYYFISGKGFCFGGMKIAVHVENLPPPPKALPIKSFAPSLKGHNILLMPIVFAIGAAWDSFIYLW* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1629 178 Gene3D - 34 137 IPR008972 -
Psa1g1629 178 SUPERFAMILY Cupredoxins 35 134 IPR008972 -
Psa1g1629 178 Pfam Plastocyanin-like domain 46 128 IPR003245 GO:0009055
Psa1g1629 178 ProSiteProfiles Phytocyanin domain profile. 36 136 IPR003245 GO:0009055
Psa1g1629 178 PANTHER BLUE COPPER PROTEIN 13 169 IPR039391 GO:0009055
Psa1g1629 178 PANTHER LAMIN-LIKE PROTEIN 13 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1629 Psa-Chr1 111839409 111842040 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1629 20 178 Phytocyanin Superfamily AT5G15350 51.852 2.90e-60 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1629 - - mtr:MTR_6g013420 322.013