Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1542 ATGAGCATAACAAACACAAAACATAGTTACAAACTCTCAGTGAAAAAAGCCACGAGAAGAACAAGAAGAAGACAAATGGAAGAGAAATGCAAGTCTAAGAAGAAGAAGCTCTCGCAGAAGCTAAAAGCACTTAAAAATTTAATCCCTTCTCACAATGGAGATGAAGTGAAAACTGATGAATTGTTCAAAGAAACTGCTGATTATATTGTTTTTCTTAGGACAAGAGTTTTCATTCTTCAGAAGCTTGTTCAGATTTATGGAAACAACAATGAGAATCAAATTGATGTATTGTTATAG 297 0.33 MSITNTKHSYKLSVKKATRRTRRRQMEEKCKSKKKKLSQKLKALKNLIPSHNGDEVKTDELFKETADYIVFLRTRVFILQKLVQIYGNNNENQIDVLL* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1542 98 MobiDBLite consensus disorder prediction 1 32 - -
Psa1g1542 98 PANTHER TRANSCRIPTION FACTOR UPBEAT-LIKE PROTEIN 13 93 - -
Psa1g1542 98 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 31 86 IPR036638 GO:0046983
Psa1g1542 98 Coils Coil 23 47 - -
Psa1g1542 98 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 13 93 IPR044660 GO:0006355
Psa1g1542 98 MobiDBLite consensus disorder prediction 12 32 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1542 22 90 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 33.333 1.18e-07 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1542 - - mtr:MTR_6g015150 145.206