Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1527 ATGATTGAAATTCCATTAAAACAAGAAGTTCTTCCATCAAAGGATTCAACTACTCCATCATCATCATCAACATCACAATGGTTAAAACTAAAGGATCCAAGAATTGTGAGAGTATCAAGAGCCTTTGGAACAAAAGATAGACATAGCAAAGTATACACAATAAAAGGACTAAGAGATAGAAGGGTAAGACTTTCAATTCAAACAGCAATTCATCTTTATGATCTTCAAGATAGATTAGGGTTAAATCAACCTAGCAAAGTTGTTGATTGGTTGCTTAATATAGCTAAGGATGAAATTGATGAACTTCCACCACTTCCAATACCTCAAGGAAATTTCACCCTAGGTTATCCATCTTTTGCTAGTACTATTTCTAATGAATATGTTTTCCAAAACAATACTTCTATTTGGAAATCAAATTCAAGACAAGGGTTAGGAGAAATTATTACTAACAAAGAAAATTGGATAGATAGAAGCGAAAAAGAGAAAGAGAAAAAAGTGGAGTCTGATGATTGTTATCACGCACAATATATTTTGTCAAATAACCTCTTTTTAGATTTGGTGTCTGACCGTACTTCAAATATGATTACTTCTAATGGAGGAAATATAAGAGAAATTTCTCAAAGAAATAATCTCTTACAAAGAGCAAATCACCCTTCTTTCTTAGAATTATTGAATCCTATGCCACTTGGTTACCAATTGGAGCCTTCATCTAATCATGTTCCTCATGATGAATTATCAAATTTTGGATTTGTTAACCAAATTAAAGATATAGATGGAATTAATGTTGTACCTTTTCAATCATCATCATCATCACTGTCTTTGTCTACACAACAATATTTACCTTCACATGTTGGTGCAATGGAGATGGATACAAGACAAATCAATTACAACTATGATCAAATGATGAATTCAAGTTCTCTCAATGCAACTCAACTATGA 939 0.3195 MIEIPLKQEVLPSKDSTTPSSSSTSQWLKLKDPRIVRVSRAFGTKDRHSKVYTIKGLRDRRVRLSIQTAIHLYDLQDRLGLNQPSKVVDWLLNIAKDEIDELPPLPIPQGNFTLGYPSFASTISNEYVFQNNTSIWKSNSRQGLGEIITNKENWIDRSEKEKEKKVESDDCYHAQYILSNNLFLDLVSDRTSNMITSNGGNIREISQRNNLLQRANHPSFLELLNPMPLGYQLEPSSNHVPHDELSNFGFVNQIKDIDGINVVPFQSSSSSLSLSTQQYLPSHVGAMEMDTRQINYNYDQMMNSSSLNATQL* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1527 312 Pfam TCP family transcription factor 43 166 IPR017887 -
Psa1g1527 312 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 15 309 - -
Psa1g1527 312 ProSiteProfiles TCP domain profile. 44 102 IPR017887 -
Psa1g1527 312 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 15 309 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1527 Psa-Chr1 104322517 104325587 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1527 27 114 TCP Transcription Factor Family AT3G02150 76.136 4.73e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Psa1g1527 TCP 2.2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1527 - - cam:101511385 287.345