Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1523 ATGTCTAAAAAGGGTTTGAAATCAATGAAGGATGAAAATCAAGATTTGCAGAAACAAATTGGATGTATCAGTGGATTTTTTCAGATGTTTGACCGTCACAGATTCCTCACAGGCCAAACCGACAGTCACAAAAACATACCAAATCAAGGGGGGACAAGTAATAATATCAAAGAGGTGAATAATGCAACACAAAAGACAAAGAATGTGAAGGTTGCAAGAGAGAATCAACAATCCTCGACAGAATCGTCATCAGGAACGTCGATGTTTTCGTCGTCTTGTTCGTCAAGCATGTCGTCGCTCGAGTTTAATCGAACAATACAGATAGAACCACCACCGTCGATAACTCAAATGAAAATCCACGAAAACTCGAGTTCAGAAGCAGCGGTGAAGCAACGCGATAAGTCACTTGATTTCCATGAGATTGTCAAAGACTCGATGCTTATAGATTCACAAAGATTATCGGTGAAAACTATGGCTAAACAGGAAAAGAAGAGTCGAGTACTGAAAAACGTCGACTCTCCGCGGCCTATGACTGCTTGGGATTCACCGAGACTCTCCTATGATGGGAGAGATTTACAAAGTGCATTAAAATCTGCGACGAAGTTTAAGGAGCTTCCTAGGCTTTCCTTGGACAGCAAGGAAAGATCAATCAAGAGTTTCAACGAAGGAACGAAAACTCGAAACCTTTTGAAGGGTCCACAGAAAGCGTGTGGAGGCTCCAATGCAATCGGAAAGCAGATAGAAGAACCAGAAAGTGCGAAAAGACCATCTAGCGTTGTGGCGAAGTTGATGGGAATAGAAGCATTCCCTGATTGGAGTGAGACTTGTGACAGCTGCAACACTGACAAAAGCGAGACGTTTATAGGATCTAGGAAGGATGGCTCGATCACGAATGTAACACCGTATTTACAATTTTCAAAGAGTAGCGAATCTTCGACAAAAGCATCAAACCGATCCCTCTCGGTTTACGGTGAAATTGAGAAAAGGATGGCGGATCTAGAGTTCAAAAAGTCCGGAAAGGATCTTAGAGCCCTTAAACAGATTCTTGAAGCAATGCACAGATACAAAGAATCAATAGATATTACAAGTGATCAGGCTTCAAATTCTCCATATGACAATAGGAGTAATAGTAGTGTCAGTGAAAGCTTGAGTGTACAAAGCCCGAGAACACGGCAGAAGAACCCGACATCGATCGCTGTTGAGAGGCTGAATTCAACTCAGGGTAGTAAATCACCAATTGTCATCATGAAACCAGGAAAGGTTGCAAGAAAAACCAATAGTTCTTCGTCAACAGAAAGTTCAATTCCCGGTAAATCATCAAGTAACAAGGTTTACCGCGGTGATGTTATGAATGTCAAAGATACTCGCGATAAATGCAACAAGATAACTTCAAAATTGATCCAATCCTCGAAAGTTCCTCGAGTCGTCATTGCAGAAAACAACACCAGCTCCAGCATGATGGCGGAGACCAGGAGCCCGAGACTACAAAAAAAGTTTGGTTTGGAGAGGCGTTCCCCGCCAACCAGCCCATCATCAGATATCAGCGGTAACAGAAGACAACAAAATAAGCAATCGACGGAATTGTCTTCCCCGAGTAAAACATCTAGACAAAAATTCTCTACTTCGAAGGAAAGAAATGAAAGCTTCAGTGAGATCGGCTATCAAAGGAGGGATTTTAAGCAAGTTGAAGCTGTTTCTAGCGGTGATATAAAAGACTCGAGCAACGAAAACTTTACGGCTGAATCAAAAGCTACCGCAGAACAACCTAGTCCCGTGTCTGTTCTTGATGCTTTCTATCGAGAAGATCCACCTTCTCCGGTTAAAAGAAAATCAGACATCTCAAAAGATTTAGAGGAAGTTCTGAACAATTGTGGTATTTGTGAGGAGGACTCAGAAGATGTAGCTCTTTCAACCAACACGAACGCGAAAGTCAACTTCAGCGATGGAACCAACGATATTGACTTGATAACTCATAATTTGGTTCAAGTTCTTCAACAATTTGACCACAGCGACGATGAAAGATTCACGAATTTCAGCGACCACAAAGATCCCGACCACAAATATATAGCAGAAATACTACTAGCATCGGGAAGGCTCACCAGTCCCGACTCTAGCAAGGCATTGCATTTGTCGGGTTACCCAATTAACCCAACATTGTTTCTTGCACTAGAGAAAATCAAAACAAACACGACGAATTTCAACGTTGCTCCGACAAACAACACTCAAGAGAAGATGCAAAGAAAGCTCGTATTCGACGTGGTTAACGAAATTCTATTTCAAAAGCTAATAACCGAAAGTTCTTACAAGCCATATCATCCAGAAGGAAGAAAACCAGAAGGACAACAGCTTCTGGACATGCTTTGCGCAGAAATCAATAAATTACAGTATAATAATAAGAACATCGGCTTTGCTAACGAGGACGAGTATTTGACGAGTATCGTGGCGGAAGATTCGGTGCAGCATTGCACAACTACAGAATGCTGCAATGAGATACCAAATCTTGTGTTGGATATTGAAAGACTGATCTTCAAAGATTTGATAACTGAAGTTGTAAGAAGTGAAAAACTAACAACTCTGGTGAGTATTGCATGA 2592 0.4155 MSKKGLKSMKDENQDLQKQIGCISGFFQMFDRHRFLTGQTDSHKNIPNQGGTSNNIKEVNNATQKTKNVKVARENQQSSTESSSGTSMFSSSCSSSMSSLEFNRTIQIEPPPSITQMKIHENSSSEAAVKQRDKSLDFHEIVKDSMLIDSQRLSVKTMAKQEKKSRVLKNVDSPRPMTAWDSPRLSYDGRDLQSALKSATKFKELPRLSLDSKERSIKSFNEGTKTRNLLKGPQKACGGSNAIGKQIEEPESAKRPSSVVAKLMGIEAFPDWSETCDSCNTDKSETFIGSRKDGSITNVTPYLQFSKSSESSTKASNRSLSVYGEIEKRMADLEFKKSGKDLRALKQILEAMHRYKESIDITSDQASNSPYDNRSNSSVSESLSVQSPRTRQKNPTSIAVERLNSTQGSKSPIVIMKPGKVARKTNSSSSTESSIPGKSSSNKVYRGDVMNVKDTRDKCNKITSKLIQSSKVPRVVIAENNTSSSMMAETRSPRLQKKFGLERRSPPTSPSSDISGNRRQQNKQSTELSSPSKTSRQKFSTSKERNESFSEIGYQRRDFKQVEAVSSGDIKDSSNENFTAESKATAEQPSPVSVLDAFYREDPPSPVKRKSDISKDLEEVLNNCGICEEDSEDVALSTNTNAKVNFSDGTNDIDLITHNLVQVLQQFDHSDDERFTNFSDHKDPDHKYIAEILLASGRLTSPDSSKALHLSGYPINPTLFLALEKIKTNTTNFNVAPTNNTQEKMQRKLVFDVVNEILFQKLITESSYKPYHPEGRKPEGQQLLDMLCAEINKLQYNNKNIGFANEDEYLTSIVAEDSVQHCTTTECCNEIPNLVLDIERLIFKDLITEVVRSEKLTTLVSIA* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1523 863 MobiDBLite consensus disorder prediction 422 446 - -
Psa1g1523 863 Pfam Domain of unknown function (DUF4378) 685 849 IPR025486 -
Psa1g1523 863 MobiDBLite consensus disorder prediction 361 448 - -
Psa1g1523 863 MobiDBLite consensus disorder prediction 538 565 - -
Psa1g1523 863 MobiDBLite consensus disorder prediction 567 589 - -
Psa1g1523 863 MobiDBLite consensus disorder prediction 39 90 - -
Psa1g1523 863 MobiDBLite consensus disorder prediction 40 90 - -
Psa1g1523 863 MobiDBLite consensus disorder prediction 480 590 - -
Psa1g1523 863 MobiDBLite consensus disorder prediction 231 254 - -
Psa1g1523 863 MobiDBLite consensus disorder prediction 361 412 - -
Psa1g1523 863 PANTHER LONGIFOLIA PROTEIN 457 854 IPR033334 GO:0051513
Psa1g1523 863 PANTHER LONGIFOLIA PROTEIN 290 451 IPR033334 GO:0051513
Psa1g1523 863 PANTHER LONGIFOLIA PROTEIN 1 293 IPR033334 GO:0051513
Psa1g1523 863 PANTHER LONGIFOLIA PROTEIN 1 293 - -
Psa1g1523 863 PANTHER LONGIFOLIA PROTEIN 290 451 - -
Psa1g1523 863 PANTHER LONGIFOLIA PROTEIN 457 854 - -
Psa1g1523 863 MobiDBLite consensus disorder prediction 505 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1523 Psa-Chr1 104145114 104150098 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1523 1 854 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 29.990 2.13e-74 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1523 - - cam:101511926 1102.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g1523 1 104145114 104150098 Psa1g1523 1 104145114 104150098 ECH