Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1517 ATGATGTTCTTCCCTTTCCTTAAACATTGTCCATGCATTCCTCTCTTCCTCATGTTTACGCTGTTTTACACTTCAACAGAAGCTTATGATCCACTTGACCCAAATGGAAATATCACAATCAAATGGGATATTTTAAGCTGGGCACCTGATGGTTATATTGCCCTTGTTACAATGAGCAACTTCCAACGGTATCGTCATATAACGGCACCAGGATGGTCGTTAGGATGGAAATGGGCAAAGAAAGAGGTAATATGGGCCATGGTGGGAGGGCAGACAACTGAACAAGGAGATTGCTTAAAGTTCAAGGAAACCATCCCACATTGTTGTGAAAGAACTCCAACAATCGTCGACTTACTTCCCGGTACGCCTTACAATCAACAAATCTCAAATTGCTGCAAAGGTGGTGTACTCAGCTCATGGACACAAGATCCAACAAATTCAGTAGCATCGTTTCAAGTCACCGTCGGTAGAGCTGGTACCACGAGCAAAACTGTCAGACTGCCACAGAATTTCACATTGAAAGCACCGGGACCAGGTTATACATGCGGCCCGACAAAAATTGTGAAACCTACTAAATTCATATCGCGAGACAAAAGGAGAGTCACGCAAGCACTTATGACATGGAATGTGACATGCACATATTCACAATTTCAAGCTCAAAAAATTCCAACTTGCTGTGTTTCCCTCTCATCTTTCTACAACGATACTATCGTACCCTGCCCAACATGTTCGTGCGGCTGCCAAGGCAACACGGCCCAATCAGGAAGCTGTGTAGATCCAATCGCGCCACATTTGGCCTCGGTTGTTAACAACTCTGGAAAGAATAGCATTACGCCTTTGGTTCGATGTACTAGTCATATGTGTCCGATTCGAGTTCATTGGCATATAAAGCTCAACTACAGGGAGTATTGGCGCATAAAGGTTACTATAACTAATTTCAACTACAGGATGAATTACTCGGATTGGAACTTGGTTGTTCAACATCCGAACTTTGACAATCTGACTCGAATTTTCAGCTTCAATTACGAACCAATAATTCCCTACGGCTCGATAAATGATACAGCATTGCTATGGGGAGTTAAATACTACAATGATTTCCTCATGCAGGCTGGTCCTAGTGGAAATGTACAGTCAGAGCTACTTTTTGGTAAGAATAAATCGACTTTTACATTCGATAAAGGTTGGGCGTTTCCTCGGAGGATCTATTTCAATGGCGACATCTGCGTGATGCCACCACCCGACGCTTATCCATGGTCACCTAATGACGGTTCCAAACAAGAAGTTTCTTTTCTTGTTTTCCACCACCCGACGCTTATCCATGGTCACCTAATGACGGTTCCAAACAAGAAGTTTCTTTTCTTGTTTTGA 1368 0.4306 MMFFPFLKHCPCIPLFLMFTLFYTSTEAYDPLDPNGNITIKWDILSWAPDGYIALVTMSNFQRYRHITAPGWSLGWKWAKKEVIWAMVGGQTTEQGDCLKFKETIPHCCERTPTIVDLLPGTPYNQQISNCCKGGVLSSWTQDPTNSVASFQVTVGRAGTTSKTVRLPQNFTLKAPGPGYTCGPTKIVKPTKFISRDKRRVTQALMTWNVTCTYSQFQAQKIPTCCVSLSSFYNDTIVPCPTCSCGCQGNTAQSGSCVDPIAPHLASVVNNSGKNSITPLVRCTSHMCPIRVHWHIKLNYREYWRIKVTITNFNYRMNYSDWNLVVQHPNFDNLTRIFSFNYEPIIPYGSINDTALLWGVKYYNDFLMQAGPSGNVQSELLFGKNKSTFTFDKGWAFPRRIYFNGDICVMPPPDAYPWSPNDGSKQEVSFLVFHHPTLIHGHLMTVPNKKFLFLF* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1517 455 PANTHER COBRA-LIKE PROTEIN 3 435 - -
Psa1g1517 455 PANTHER PROTEIN COBRA 3 435 IPR006918 GO:0010215|GO:0031225
Psa1g1517 455 PIRSF COBRA 2 447 IPR006918 GO:0010215|GO:0031225
Psa1g1517 455 Pfam COBRA-like protein 52 215 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1517 Psa-Chr1 103293007 103295761 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1517 15 443 COBRA Gene Family AT3G02210 72.350 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1517 - - gmx:100783820 764.222