Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1516 ATGGCTGCTCCTGAGATTAACTGGGATAGGCTAGATATAATGAAATTCTATGCAGGGGGAGCTGGACTATTTTCTGGTGTTACTGTGTTACTCTACCCTGTCTCTGTTGTGAAGACTAGGATGCAGGTTGCTTCGAAGGATACTGCAGAGAGAAGTGCATCTTCTGTTGTGAAAGGATTGCTTAAGAAAGATGGTATCCGTGGTTTGTATAAAGGGTTTGCCACCGTCCTCACTGGAACAATACCTGCCAGAATCGTATTTCTCACTTTCTTAGAGACCACGAAGGAAGCTTCCTTCAAGATGGTTAAACCGTTTAAACTGTCTGAAACTAGTCAGGCTGCAATAGCGAATGGCATTCGCAAAGGACAGTTATCGGCGTTGTGTCACAAATTCTTGGAAGATGATGTCAAATCTGAGGAAGCTACTCCTAGTCTGGCAAAGATTGTTTTAGTTCAGGCAGGAGGGGGTCTCATTGCTGGTGCTACTGCCTCGTGCATTACAACTCCACTTGATACAATCAAGACACGGTTACAGGTGACAGGACATGGAAAGAAAATCTCTGTTAAACAAGTAGTTAAAGATTTGATTAGGGAGGACGGTTGGAAAGGTGTATATAGAGGATTTTGTCCAAGATTGATCAGCACGTCAGCATGGGGTACTTCAATGGTATTGGCTTATGAATATCTGAAGCGCCTATGCGTAAAAAAAGATGAAGAAGCAGCTGGCAGCCATTCTAACTGA 741 0.4345 MAAPEINWDRLDIMKFYAGGAGLFSGVTVLLYPVSVVKTRMQVASKDTAERSASSVVKGLLKKDGIRGLYKGFATVLTGTIPARIVFLTFLETTKEASFKMVKPFKLSETSQAAIANGIRKGQLSALCHKFLEDDVKSEEATPSLAKIVLVQAGGGLIAGATASCITTPLDTIKTRLQVTGHGKKISVKQVVKDLIREDGWKGVYRGFCPRLISTSAWGTSMVLAYEYLKRLCVKKDEEAAGSHSN* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1516 246 ProSiteProfiles Solute carrier (Solcar) repeat profile. 147 232 IPR018108 -
Psa1g1516 246 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 1 128 - -
Psa1g1516 246 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 128 237 - -
Psa1g1516 246 SUPERFAMILY Mitochondrial carrier 9 238 IPR023395 -
Psa1g1516 246 Pfam Mitochondrial carrier protein 21 100 IPR018108 -
Psa1g1516 246 Pfam Mitochondrial carrier protein 154 236 IPR018108 -
Psa1g1516 246 Gene3D Mitochondrial carrier domain 11 244 IPR023395 -
Psa1g1516 246 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 97 IPR018108 -
Psa1g1516 246 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 128 237 - -
Psa1g1516 246 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1516 Psa-Chr1 103279945 103282939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1516 21 237 Chloroplast and Mitochondria Gene Families AT5G15640 44.144 4.82e-44 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1516 K15121 - gmx:100819519 202.986