Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1510 ATGACTATTGGAAGTGATAGGAAGAACAAGGCAATGGTTGATGAGAATGCACCTTTGTTACCTAAGACTCAAGAAAGTGTTGCTAAGTTTGATGATTTTAATGGAGCTTCATTTTCTAGTGCTGTTTTCAATTTGTCAACAACAATTATTGGTGCTGGAATCATGAGTTTGCCAGCTTGTGTTAAAAAATTGGGAATGATACCTGGTCTTACTGCCATAATCCTTTCATCATTATTTACAGAAAAGTCAATTGATTTCATGATCAGATTTTCAAGAGCAGGGAATGTTTCTTCCTATGGAAGTCTCATGGGTGATAGCTTTGGAAAATATGGAAAAGCTTTGGTCCAGATGTGTATTACAGTCAATAATATTGGTTTTATGATTATTTACATGATTATTATTGGTGATATAATTTCTGGAACATCTTCAAGTGGAGGACACCATCATGGTGTCCTCGAAGGATGGTTCGGCGTTCATTGGTGGACCGGGCGTACATTTGTTCTTGTTATTACAACACTTACCGTAGTTGTACCTTTGACGAGTTTTAAAAGAATTGATTCTTTGAGATACACATCTGCATTATCAATTGGACTGGCAGGTGTTTTTCTTGTCGTTGTTGCTGGAATCTCAATTGTCAAGATCATAAATGGAGACACAACAATTCCAAGACTATTTCCAATCATTACTGATGCAGCATCAGTTTTTGAATTGTTCACCACATTTCCTGTACTTCTAAGCGCCTATATTTGCCACACTGTTGTTCACAGTATAAATAATGAATTAAAGGATTCGAAACAGATGCAAGGAGTTGTGAGAGCTTCCATTGTTCTATGCTCCTCGGTGTACATACTCATAAGCTTCTTCGGATTCCTTCTATTTGGTGAAGAAATATTCGACGATGTTCTTGCCAATTTCGATACCGATCTTGGAATACCATTCAGTCTTATTCTCAATGACATTGTTCGGGCTAGCTATGCCGCGCATCTCGCGCTTATATTTCCAGTAATCTTCTACGCAGTTCGGGTCAACATCGATGGACTCTTGTTTTCTTCTTCATCAAGGCTTTTGGTAGATGATAACTTTAGATTTTTCTCTATTACTTTTTCTCTTGTTGGCATTATGTTCTTGGGAGCAAACTTCATACCTAGCATTTGGGATATTTTCCAATTCATTGGAGCAACTACTGCTCTTTGTGTAGGATTTATATTTCCAGCTGCAATCGCTCTCAGTGATAAACACAATATAGCAACTAAATCAGACAAGATTCTATCAGTTTCTATGATCATCCTTTCAGTATTATCAAGCGTTGTGGCTATATACATTAATGCTTATGCCTTGATCAACAAGAATAAAGTTTAA 1359 0.3687 MTIGSDRKNKAMVDENAPLLPKTQESVAKFDDFNGASFSSAVFNLSTTIIGAGIMSLPACVKKLGMIPGLTAIILSSLFTEKSIDFMIRFSRAGNVSSYGSLMGDSFGKYGKALVQMCITVNNIGFMIIYMIIIGDIISGTSSSGGHHHGVLEGWFGVHWWTGRTFVLVITTLTVVVPLTSFKRIDSLRYTSALSIGLAGVFLVVVAGISIVKIINGDTTIPRLFPIITDAASVFELFTTFPVLLSAYICHTVVHSINNELKDSKQMQGVVRASIVLCSSVYILISFFGFLLFGEEIFDDVLANFDTDLGIPFSLILNDIVRASYAAHLALIFPVIFYAVRVNIDGLLFSSSSRLLVDDNFRFFSITFSLVGIMFLGANFIPSIWDIFQFIGATTALCVGFIFPAAIALSDKHNIATKSDKILSVSMIILSVLSSVVAIYINAYALINKNKV* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1510 452 Pfam Transmembrane amino acid transporter protein 36 440 IPR013057 -
Psa1g1510 452 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 6 450 - -
Psa1g1510 452 PANTHER AMINO ACID TRANSPORTER 6 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1510 Psa-Chr1 102720883 102723120 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1510 6 450 Amino Acid or Auxin Permease AAAP Family AT5G38820 57.623 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1510 K14207 - gmx:100791286 607.446