Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1508 ATGGCTGCAACTTCACCTCCATTGAAAGATGAACTTGACATTGTCATCCCTACTATAAGAAACCTAGATTTCTTAGAAATGTGGAGGCCATTCTTCGAACCTTATCATTTGATCATTGTTCAAGATGGTGACCCTACAAAAACCATCCAAGTTCCATCTGGTTTTGATTATGAACTTTACAACAGGAACGATATTAACAAGATTCTTGGTCCTAGAGCTTCTTGTATCTCATTCAAAGACTCTGCATGTCGTTGCTTCGGTTACATGGTTTCGAAGAAGAAATACATCTTCACCATTGATGATGATTGTTTTGTTGCTAATGATCCATCTGGAACTCAAATCAATGCGCTTCAGCAGCATATTAAGAATCTTCTGTGTCCTTCCACACCTTTGTTTTTCAATACTCTCTATGATCCTTTTAGAGAAGGTGCGGATTTTGTTCGCGGATACCCTTTTAGTCTTCGCGAAGGTGTTCCAACAGCTATCTCTCATGGACTTTGGCTCAACATTCCTGATTATGATGCTCCTACACAGCTTGTCAAGCCTCGCGAGAGGAACACTAGGTATGTGGATACTGTTTTGACAATACCAAAAGGAACATTGTTTCCAATGTGTGGAATGAATTTGGCATTTGATCGTGATCTGATTGGACCAGCCATGTACTTTGGTCTCATGGGAGATGGTCAGCCTATTGGACGATATGATGATATGTGGGCTGGCTGGTGCTGCAAGGTGATTTGTGATCATTTGGGGCTAGGAATCAAGACTGGACTCCCCTACATCTACCATAGCAAAGCAAGCAATCCATTTGTGAACCTAAGGAAAGAGTACAAAGGGATATTCTGGCAGGAAGATATCATTCCATTTTTCCAAAATCTTGTTCTTTCAAAAGAATGCACAACTGTTCAAAAGTGTTACATTGAAATGTCAAAGGAAGTCAAAGAAAAACTTGGAAAGATTGATCCTTATTTTGACAAATTGGCAGATGCTATGGTCACTTGGATTGAAGCTTGGGATGAACTTAACCCTGCCAAAGCATCTTAG 1044 0.4023 MAATSPPLKDELDIVIPTIRNLDFLEMWRPFFEPYHLIIVQDGDPTKTIQVPSGFDYELYNRNDINKILGPRASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVANDPSGTQINALQQHIKNLLCPSTPLFFNTLYDPFREGADFVRGYPFSLREGVPTAISHGLWLNIPDYDAPTQLVKPRERNTRYVDTVLTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCCKVICDHLGLGIKTGLPYIYHSKASNPFVNLRKEYKGIFWQEDIIPFFQNLVLSKECTTVQKCYIEMSKEVKEKLGKIDPYFDKLADAMVTWIEAWDELNPAKAS* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1508 347 SUPERFAMILY Nucleotide-diphospho-sugar transferases 32 242 IPR029044 -
Psa1g1508 347 PANTHER ALPHA-1,4-GLUCAN-PROTEIN SYNTHASE [UDP-FORMING]-LIKE PROTEIN 3 346 - -
Psa1g1508 347 Pfam Reversibly glycosylated polypeptide 9 342 IPR037595 -
Psa1g1508 347 PANTHER UDP-ARABINOSE MUTASE 3 346 IPR037595 -
Psa1g1508 347 PIRSF UPTG 2 346 IPR004901 GO:0016866|GO:0071669
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1508 Psa-Chr1 102482731 102484975 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1508 K13379 - gmx:100778357 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g1508 1 102482731 102484975 Psa1g1508 1 102482731 102484975 ECH
Psa1g1508 1 102482731 102484975 Psa3g4653 3 432018345 432022004 ECH
Psa2g3004 2 343235418 343238436 Psa1g1508 1 102482731 102484975 ECH