Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1505 ATGAGGTTTCTTATCTCATTTCTCTGTGTTCTTGTGTTAGTCTCTTATGCCGTTGCTTATGATCCTATGGATCCAAATGGAAATATAACGATCAAATGGGATGTTATGTCGTGGACACCAGATGGCTATGTGGCGACGGTAACGATCAACAATTTCCAAATGTTTCGACATATAATGAATCCGGGATGGACGTTAGGATGGACATGGGCTAAGAAAGAGGTTATATGGTCGATGGTAGGAGCTCAAACGACAGAACAAGGAGATTGTTCTAAATTCAAAGGAAATATACCTCATTGTTGCAAGAAAATTCCCACAGTTGTAGACCTTCTACCTGGTGTACCTTACAACCAACAGTTTTCAAACTGTTGTAAAGGTGGAGTTGTTGCGGCTTGGGGACAAGATCCTTCGCAATCTGTATCCGCTTTTCAAGTTAGTGTAGGACAAGGTGGAACCTCGAACAAAACGGTTAAACTTCCGAAGAATTTCACTCTTTTGGCTCCTGGACCTGGTTATACTTGTGGTCCTGCAAAGGTTGTTCCTTCCACGGTTTTTCTTACGACTGATAAGCGCCGCAAGACTCAAGCGTTGATGACATGGAATGTTACATGCACATATTCACAATTTCTAGCAAGAAAGAATCCAAGTTGTTGTGTATCTTTATCATCCTTCTACAATGAAACAATTACACCTTGTCCCTCTTGTGCATGTGGCTGCCAAAACAAGAAGAACTGTGTAAAGAGTGACTCAAAAATTCTGAGCATGGTTGGAGTTCACACTCCAAAGAAAGACAATGAAGCATTGACGCAATGCACTCATCATATGTGTCCAATTAGAGTTCATTGGCATGTGAAGACTAACTATAAGGACTATTGGCGCGTCAAAATCGCAGTAACGAATTTCAATTACAGGATGAACTATACTCTCTGGACTCTTGCTATTCAACATCCAAATCTTAACAATGTCACACAAGTTTTCAGCTTCAACTACAAGCCACTTCTTCCCTATGAATCCATAAATGACACAGGAATGTTCTATGGAATGAAATACTTCAATGATCTACTAATGGAAGCTGGACCAAAGGGAAACATTCAATCAGAAGTATTACTTCAGAAAGACAAAAAATTCACATTCAAACAAGGATGGGCATTTCCTCATAAGGTTTACTTCAATGGTGATGAATGCATGCTTCCTCATCCTGATACATACCCTTTTCTCCCTAATTCCTCACCCGCAACCATAGCTACTTTCAAAGCACTCATCTTCTCATTACTTTTATTGCTAGCAGTTTCGTAG 1293 0.4006 MRFLISFLCVLVLVSYAVAYDPMDPNGNITIKWDVMSWTPDGYVATVTINNFQMFRHIMNPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNIPHCCKKIPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSQSVSAFQVSVGQGGTSNKTVKLPKNFTLLAPGPGYTCGPAKVVPSTVFLTTDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCPSCACGCQNKKNCVKSDSKILSMVGVHTPKKDNEALTQCTHHMCPIRVHWHVKTNYKDYWRVKIAVTNFNYRMNYTLWTLAIQHPNLNNVTQVFSFNYKPLLPYESINDTGMFYGMKYFNDLLMEAGPKGNIQSEVLLQKDKKFTFKQGWAFPHKVYFNGDECMLPHPDTYPFLPNSSPATIATFKALIFSLLLLLAVS* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1505 430 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0031225
Psa1g1505 430 PIRSF COBRA 1 430 IPR006918 GO:0010215|GO:0031225
Psa1g1505 430 PANTHER COBRA-LIKE PROTEIN 4 428 - -
Psa1g1505 430 PANTHER PROTEIN COBRA 4 428 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1505 Psa-Chr1 102447445 102449712 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1505 3 429 COBRA Gene Family AT3G29810 65.057 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1505 - - gmx:100798678 820.846