Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1478 ATGCAAGGAGTTGTGAGAGCTTCCATTGTTCTATGCTCCTCGGTGTACATACTCACAAGCTTCTTCGGATTCCTTCTATTTGGTGAAGAAATATTCGACGATGTTCTTGCCAATTTCGATACCGATCTTGGAATACCATTCAGTCTTATTCTCAATGACGTTGTTCGGGCTAGCTATGCCGCGCATCTCGCGCTTATATTTCCAGTAATCTTCTACGCAGTTCGGGTCAACATCGATGGACTCTTGTTTTCTTCTTCATCAAGGCTTTTGGTAGATGATAACTTCAGATTTTTCTCTATTACTTTTTCTCTTGTTGGCATTATGTTCTTGGGAGCAAATTTCATACCTAGCATTTGGGATATTTTCCAATTCATTGGAGCAACTACTGCTCTTTGTGTAGGGTTTATATTTCCAGCTGCAATCACTCTCAGTGATAAACACAAGATAGCAACTAAATCAGACAAGATTCTATCAGTTTCTATGATCATCCTTTCAGTATTATCAAGCGTTGTGGCTATATACAGTAATGCTTATGCCTTGATCAAGAAGAATAAAGTTTAA 561 0.385 MQGVVRASIVLCSSVYILTSFFGFLLFGEEIFDDVLANFDTDLGIPFSLILNDVVRASYAAHLALIFPVIFYAVRVNIDGLLFSSSSRLLVDDNFRFFSITFSLVGIMFLGANFIPSIWDIFQFIGATTALCVGFIFPAAITLSDKHKIATKSDKILSVSMIILSVLSSVVAIYSNAYALIKKNKV* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1478 186 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 1 184 - -
Psa1g1478 186 PANTHER AMINO ACID TRANSPORTER 1 184 - -
Psa1g1478 186 Pfam Transmembrane amino acid transporter protein 1 174 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1478 Psa-Chr1 100238526 100239765 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1478 1 184 Amino Acid or Auxin Permease AAAP Family AT3G30390 63.587 1.40e-79 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1478 K14207 - gmx:100791286 261.536