Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1476 ATGACTATAGGAAGTGATACGAAGAACAAGGCAACGGTTGATGAGAATTCACCTTTATTACCTAAGATTCAAGAAAGTGATGTTAAGTTTAATGGAGCTTCATTTTCTAGTTCAGTTTTCAATTTGTCAACCACCATTATTGGTGCTGGAATCATGGCCTTGCCTGCATGTGTGAAAAAACTAGGGATTGTACCTGGCCTTACTGCCATAGTCCTAACAGCATTATTAACAGAAAAATCAATTGATTTCATGATCAGATTTTCAAGAGCAGGGAATATTTCTTCCTATGGAAGTCTCATGGGGGATACCTTTGGAAAATATGGAAAATCTTTGGTTCAAATATGTATTATAGTCAATAACATTGGTTGTTTGATTATTTACCTGATTATTATTGGTGATGTGATTTCTGGAACATCTTCAAGTGGAATACATCATTATGGTATTCTTGAAGGATGGTTTGGCCTTCATTGGTGGACTGGACGTTCATTTGTTATTGCTTTTACAACACTTGTTGTAGTTGCACCTTTGGTCAACTTTAAGAGAATTGATTCATTGAGATTCACATCTGCATTATCAGTTGGACTAGCAGGTGTTTTTCTTGTCATTGTTGTAGGAATCTCAATTGTCAAAATCATAAGTGGAGGAATAATGATTCCAAGACTCTTCCCAATCATCACTGATCTAGCATCAGTTTTTGAGTTGTTCACCACAGTTCCTGTTCTTGTAACCGCCTATATTTGTCACACCAATGTTCACAGTATAAATAATGAACTGAAGGATTCAACACAGATGCACCGTGTTGTGAAGACTTCCGGTGTTTTATGCTCTTGTGTATACTTACTCTCAAGCTTCTTCGGATTCCTATTATTCGGAGAAGAAACTCTTGAGGATGTTCTTGCCAATTTCGATATTGATCTTGAAATACCGTTTGGTTTAATTCTCAACGACATTATTCGCGTTAGCTATGCTGCACATCTCATGTTCGTATTTCCAGTAATCTTTTATGCAGCGCGGATCAACATCGATGGACTCTTGTTTTCTTCTTCTTCAACAAGGCCTTTGGTTGTTGATAACTTCAGATTTGGCTCTATTACTTTTTCTCTTGTTGGCATTATATTTTTGGGAGCAAACTTCATACCTAGCATTTGGTATATTTTCCAATTCTTTGGAGCAACTACTGCCATTTGTGTAGGATTTATATTTCCAGCTGCAATCACTCTCAGGGATAAATACAACATATCAACTAAATCAGACAAAACTCTATCAATCTTTATGATCGTCCTTTCAGTATCATCAAGTGTTGTGGCTATCTATAGTAATGTATATGCCTTGTTCAAGAAGAATGAAGCTTACTGA 1356 0.3636 MTIGSDTKNKATVDENSPLLPKIQESDVKFNGASFSSSVFNLSTTIIGAGIMALPACVKKLGIVPGLTAIVLTALLTEKSIDFMIRFSRAGNISSYGSLMGDTFGKYGKSLVQICIIVNNIGCLIIYLIIIGDVISGTSSSGIHHYGILEGWFGLHWWTGRSFVIAFTTLVVVAPLVNFKRIDSLRFTSALSVGLAGVFLVIVVGISIVKIISGGIMIPRLFPIITDLASVFELFTTVPVLVTAYICHTNVHSINNELKDSTQMHRVVKTSGVLCSCVYLLSSFFGFLLFGEETLEDVLANFDIDLEIPFGLILNDIIRVSYAAHLMFVFPVIFYAARINIDGLLFSSSSTRPLVVDNFRFGSITFSLVGIIFLGANFIPSIWYIFQFFGATTAICVGFIFPAAITLRDKYNISTKSDKTLSIFMIVLSVSSSVVAIYSNVYALFKKNEAY* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1476 451 Pfam Transmembrane amino acid transporter protein 33 438 IPR013057 -
Psa1g1476 451 PANTHER AMINO ACID TRANSPORTER 6 448 - -
Psa1g1476 451 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 6 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1476 Psa-Chr1 100188588 100211869 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1476 8 448 Amino Acid or Auxin Permease AAAP Family AT3G30390 61.659 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1476 K14207 - gmx:100791286 630.172