Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1475 ATGACAATTGGAACTCTTGCACCTGAGGCAGAGAATAAGAAAATAAGGAAGAGAGAAGTTTCTGATGAGAATGCACCTTTGTTACCTAAGTCTCAAGAAACAGATGGCGAGTTTCATGAATTTAATGGAGCTTCATTTCCTGGGGCTGTTTTCAATTTGTCCACCACAGTTATTGGTGCTGGGATAATGGGCTTGCCTGCTTGCGTAAAAAAGTTGGGAATGGTGCCTGGTCTTCTTGCAATAATCCTAACAGCATTATTGACAGGGAAGTCAATTGAGTTCATGATCAGGTTTTCAAGGGCAGGAAAGCTTTCTTCCTATGGAAATCTGATGGGGGATGCCTTTGGGAAATACGGAAAAGCACTGATAGAAACATGTGTTGTCGTCGCTAACGTTGGTATTCTAATTGTTTACATGATTATTATTGGTGATGTGATTTCTGGAACTGCTTCAAGTAAAATTCATCATTCTGGTATCCTTGAAGGATGGTTTGGTGTCCATTGGTGGACTGGGCGTACATTTGTTCTTGTTTTCACCACACTTGCTGTATTTGCACCTTTGGTCAGCCTTAAGCGAATTGATTCATTGAGATTCACATCTGCATTGTCAATTGGATTAGCGGTTGTTTTCCTTATCATTGCTGTGGGGATCTCAATTTTCAAGCTCATAAGTGGAGGCATTGGGATGCCAAGACTCTTCCCAATCATTACTGATGTTGCTTCAGTTTTTGATCTATTCACTGTAACTCCTGTGGTGATGTCAGCCTACATCTGTCACTACAATGTTCATAACATAGATAATGAACTGGAGGATTCCTCATGGATGCCGGGGGTTGTTCGTACTTCCCTTACACTATGCTCTTCAGTGTACGTACTGACAAGCTTCTTTACGTTCCTTCTATTTGGTGAAGGAACTCTTGATGACGTGCTTGCCAATTTTGATGCTAATCTTGGAATTCCTTTTGGTTCTGTGCTTAATGACATTGTTCGTATTAGCTATGCTGCGCATCTTGTGCTTGTATTTCCTGTAGTTTTCTATGGATTAAGGGTCAACATAGATGGTCTGATATTTACCTCATCAAGAAGGCCGTTGGTTGCCGATAACTTCAGATTTGCATCAATTACTATCGGTCTTGTTGTCTCTATCTTCCTTGGAGCAAATTTCATACCTAGCATTTGGGATATTTTCCAGTTCACCGGAGCAACAGCTGCTGCTTGTGTAGGATTCATCTGTCCAGCTGCAATCACTCTTAGGGATAAATACAACATAGCAACCAAAACAGACAGGACTCTGGCTGTCCTTATGATAATCCTTGCAGTCTTGTCAAATGCTGTGGCTATATACAGTGATGTCATTGCCTTGATCAAGAAGAATCAAACTTAA 1383 0.41 MTIGTLAPEAENKKIRKREVSDENAPLLPKSQETDGEFHEFNGASFPGAVFNLSTTVIGAGIMGLPACVKKLGMVPGLLAIILTALLTGKSIEFMIRFSRAGKLSSYGNLMGDAFGKYGKALIETCVVVANVGILIVYMIIIGDVISGTASSKIHHSGILEGWFGVHWWTGRTFVLVFTTLAVFAPLVSLKRIDSLRFTSALSIGLAVVFLIIAVGISIFKLISGGIGMPRLFPIITDVASVFDLFTVTPVVMSAYICHYNVHNIDNELEDSSWMPGVVRTSLTLCSSVYVLTSFFTFLLFGEGTLDDVLANFDANLGIPFGSVLNDIVRISYAAHLVLVFPVVFYGLRVNIDGLIFTSSRRPLVADNFRFASITIGLVVSIFLGANFIPSIWDIFQFTGATAAACVGFICPAAITLRDKYNIATKTDRTLAVLMIILAVLSNAVAIYSDVIALIKKNQT* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1475 460 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 10 459 - -
Psa1g1475 460 Pfam Transmembrane amino acid transporter protein 44 449 IPR013057 -
Psa1g1475 460 MobiDBLite consensus disorder prediction 10 32 - -
Psa1g1475 460 MobiDBLite consensus disorder prediction 10 24 - -
Psa1g1475 460 PANTHER AMINO ACID TRANSPORTER 10 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1475 Psa-Chr1 100057923 100063035 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1475 11 458 Amino Acid or Auxin Permease AAAP Family AT5G38820 62.444 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1475 K14207 - gmx:100791286 712.99