Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1473 ATGACGATTGGGAATCTTGCTTCTGAGAATAAGAAAACAAGGAAGAAGAGGGAAATTGTTGAGGAGAATGCGCCTTTGATACCTAAGTCTCAAGAATCGAATTCCGAATTTCATGAATTTAATGGAGCTTCATTTTCCGGGGCTGTTTTCAATTTGGCTACCACAACTATTGGTGCTGGAATCATGGGTTTGCCTGCTTGTGTTAAGAAATTGGGAATGGTGCCTGGTCTTATTGCTATAATCCTAACAGCATTGTTGACAGAGAAGTCACTTGAGTTCATGATTAGGTTTTCAAGGGCAGGGAATCTTTCTGCCTATGGAAGTCTTATGGGGGATTCCTTTGGGAGATATGGAAAAGCTTTGTTGGAGATATGTGTTGTAATCCATAACACTGGTGCTTTGATTGTCTACATGATTATCATCGGCGATGTGATTTCTGGAACAACTTCAAATGGAATTCACCATTCTGGTATCCTTGAAGGATGGTTTGGTGTCTACTGGTGGACTGGGCGTACATTTGTTCTTGTTTTTACAACACTTGCTATATTTGCACCTTTGGTTAGTCTTAAGCGAATTGATTCATTGAGATACACATCTGCATTGTCAATTGGGTTAGCTGTTGTTTTCCTTGTCATTGCTGTGGGGATCTCAATTATCAAGATTATTAGTGGTGGCATTGGAATGCCCAGACTCTTCCCGGTCATTACTGACGCAGCTTCAGTTTTTGATCTATTTACTGTAGTTCCTGTGCTGGTGACCGCTTACATCTGTCACTACAATGTTCACAACATAGATAATGAACTGGAAGATTCCTCCTGGATGCATGGGGTTGTGCGTACTTCCGTTACTCTATGCTCTTCAGTGTACTTACTGACAAGCTTCTCTGCGTTCCTTCTATTTGGTGATGAAACTCTTGATGACGTGCTTGCCAATTTTGATACTAATCTTGGAATTCCTTTGGGTTCGGTGCTCAATGACGCTGTTCGTTTTAGCTATGCTGCACATCTTGTTCTTGTATTTCCTGTAGTTTTCTATGGATTAAGGGTCAATGTAGATGGTCTGATATTTACCTCATCGAAAAGGCCTTTGGTTATTGATAACTTCAGATTTGCATCAATTACGATTTCCCTCGTTGGCATTATCTTCATGGGAGCAAACTTCATACCTAGCATTTGGGATATTTTCCAGTTCACTGGAGCAACTGCTGCTGTTTGTTTAGGATTCATATTTCCAGCTGCAGTCACTCTGAGGGATCGCTACAACATAGCAACTAAAAGCGACAAAATACTATCTGTTTTTATGATAGTCCTGGCAGTCTTGTCAAATGCTGTTGCTATATACAGTGATGCCTATGCTTTGATCAACAAGAACAAAAATGTCTGA 1383 0.4049 MTIGNLASENKKTRKKREIVEENAPLIPKSQESNSEFHEFNGASFSGAVFNLATTTIGAGIMGLPACVKKLGMVPGLIAIILTALLTEKSLEFMIRFSRAGNLSAYGSLMGDSFGRYGKALLEICVVIHNTGALIVYMIIIGDVISGTTSNGIHHSGILEGWFGVYWWTGRTFVLVFTTLAIFAPLVSLKRIDSLRYTSALSIGLAVVFLVIAVGISIIKIISGGIGMPRLFPVITDAASVFDLFTVVPVLVTAYICHYNVHNIDNELEDSSWMHGVVRTSVTLCSSVYLLTSFSAFLLFGDETLDDVLANFDTNLGIPLGSVLNDAVRFSYAAHLVLVFPVVFYGLRVNVDGLIFTSSKRPLVIDNFRFASITISLVGIIFMGANFIPSIWDIFQFTGATAAVCLGFIFPAAVTLRDRYNIATKSDKILSVFMIVLAVLSNAVAIYSDAYALINKNKNV* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1473 460 Pfam Transmembrane amino acid transporter protein 43 447 IPR013057 -
Psa1g1473 460 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 457 - -
Psa1g1473 460 MobiDBLite consensus disorder prediction 1 25 - -
Psa1g1473 460 Coils Coil 3 23 - -
Psa1g1473 460 MobiDBLite consensus disorder prediction 9 23 - -
Psa1g1473 460 PANTHER AMINO ACID TRANSPORTER 7 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1473 Psa-Chr1 100021997 100025570 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1473 16 460 Amino Acid or Auxin Permease AAAP Family AT5G38820 64.206 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1473 K14207 - gmx:100791286 715.687