Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1467 ATGCAAACAAGAGAAGTAACAACAACAGGACTCAACTACATGCTCCCATCAAACACATCACCCTATCTTCAAACCTACAACAACATTAATCCAACATTCCATCTCCAAAAACTCTCAAACCAATTATTCAATTACCAAAACACCCCTCAATTTCATCATGACTTCAATTATAGTCCTCAATCCTCATGCATAAGTAGCAACTCAACTTCTGATGAAGCTGATGAACAAAACCTAAGCCTCATCAACGAGAGGAAACACCGAAGGATGATATCGAACCGAGAATCGGCTCGTCGATCGCGTATGAGGAAGCAGAAACACCTTGATGAACTTTGGTCACAAGTTCTTTGGTTGAGGAATGAAAATCATCAACTTATAGAGAAACTTAACCATGTTTCGGAGAATCATGATCAAGTTGTTCAAGAGAATTCTCAGCTGAAAGAAGAAGCTTTGGAACTTAGACAAATGATAAGAGACATGCAGATTCATAGTCCTTTGATTCCTTCTTTTGGTCCTTTGGAAGATACTTATCTTAGAGATGATTCTTCAAACAATTCCATCTAA 561 0.3797 MQTREVTTTGLNYMLPSNTSPYLQTYNNINPTFHLQKLSNQLFNYQNTPQFHHDFNYSPQSSCISSNSTSDEADEQNLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQLIEKLNHVSENHDQVVQENSQLKEEALELRQMIRDMQIHSPLIPSFGPLEDTYLRDDSSNNSI* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1467 186 Coils Coil 128 162 - -
Psa1g1467 186 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Psa1g1467 186 CDD bZIP_plant_GBF1 85 136 IPR045314 GO:0003700|GO:0006355
Psa1g1467 186 SUPERFAMILY Leucine zipper domain 84 137 IPR046347 GO:0003700|GO:0006355
Psa1g1467 186 Pfam bZIP transcription factor 84 136 IPR004827 GO:0003700|GO:0006355
Psa1g1467 186 PANTHER BZIP TRANSCRIPTION FACTOR 1 183 - -
Psa1g1467 186 Gene3D - 82 137 - -
Psa1g1467 186 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
Psa1g1467 186 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 183 IPR044521 -
Psa1g1467 186 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 145 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1467 Psa-Chr1 99774035 99774976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1467 59 165 bZIP Transcription Factor Family AT3G30530 73.636 4.11e-50 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa1g1467 bZIP_1 2.7e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1467 - - gmx:100791105 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa1g1467 1 99774035 99774976 Psa3g4419 3 416376606 416378418 PCT