Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa1g1452 | ATGGAAATTTCAAGAGGGGAAGGTTTTCTATGTTTTGTGACATTGTTCTTGTTTTTGTGTTCTACTAATGCTTTGCTTTCTCCTAAAGGAATTAACTTTGAAGTTCAAGCTTTGATGAGTATAAAAGCTTCATTAATGGATCCTCATGGAATTCTAGAGAATTGGGATGCTTCATTAATGGATCCTCATGGAATTCTAGAGAATTGGGATGGTGATGCTGTTGATCCATGTAGTTGGAATATGGTTACTTGTTCTACTGAGAATCTTGTTATTAGTTTGGGAATTCCTAGTCAGAATTTATCTGGTACATTATCACCAAGCATTGGAAAGTTAACAAATCTTCAAACTATTATGTTACAGAATAACAACATAACTGGACCAATCAGTTCAGAGCTAGGAAAACTTTCCATGCTTCAAACACTTGATCTCTCTGATAACTTCTTCAATGGAAAGATTCCTACTTCTCTTGGTCATCTGAGAAAGCTTCAATACTTGAGGCTTAATAATAACAGTTTTTCCGGTGAATGTCCTGAGTCGTTGGCGAACATGGCGCAACTTACTTTTCTTGATTTGTCATTCAACAATCTTAGTGGCAGTGTGCCTAGAATCTTGGCCAAATCATTCAGTATTGTTGGAAACCCTCTGGTCTGCGCGACAGCAAAAGAAACAAACTGCCATGGGATGAAACTCATGCCTATGTCAATGAACTTAAACAATACTAACGATGCATTACCATCAAGAAGAACAAAAGCTCACAAAAGGGTCATTGCGTTTGGTTTAAGTCTTGGATGCCTTTGCTTATTAGTCCTTGTCCTTGGTTTCGGATTTTTACTATGGAGGAGACACAAACATAATCAACAAACATTCTTTGATGTTAAAGACCGACATCACGAAGAAGTCTACCTAGGAAACTTGAAGAGGTTCCAATTAAGAGAACTCCAAATTGCTACTCACAACTTCAGCAACAAAAACATATTAGGAAAAGGTGGTTTCGGCATTGTCTACAAAGGAATTCTTTCGGACGGTACGCTTGTCGCTGTAAAGAGGCTTAAAGACGGAAACGCCAAGGGAGGAGAGATACAATTTCAGACCGAAGTTGAAATGATCAGCTTAGCAGTTCATCGAAACCTTCTCAAACTCTATGGATTTTGTATGACTTCATCAGAAAGACTTTTGGTTTACCCCTACATGTCAAATGGTAGCGTCGCTTCTCGTCTCAAAGCTAAGCCGGTGTTGGATTGGGGCACAAGGAAGCAAATTGCATTAGGAGCAGGAAGAGGACTATTATACCTACATGAGCAATGTGATCCAAAGATAATCCATAGAGACGTGAAAGCTGCAAATATACTACTTGATGATTATTGTGAGGCAGTAGTTGGAGATTTTGGTTTGGCAAAGCTTTTAGACCACAAAGATTCACATGTCACAACTGCGGTTAGGGGCACAGTAGGACATATTGCACCTGAGTATCTTTCCACAGGACAGTCTTCTGAAAAGACTGATGTTTTTGGATTTGGCATTTTGCTTCTTGAATTGATTACTGGTTTGAGGGCCCTTGAATTTGGAAAGGCTGCCAACCAAAAAGGAGCCATGCTGGACTGGGTAAAGAAAATTCATCAAGAGAAGAAGCTAGATTTGCTTGTAGACAAAGATCTCAAGAACAACTATGACAAGATTGAGCTTGAGGAAATAGTTCAAGTTGCACTTTTGTGTACACAATATCTTCCGAGTCACAGACCGAAAATGTCCGAAGTCGTACGCATGCTCGAAGGCGACGGTCTAGCCGAGAAATGGGAAGCTTCTCAAAGAGCTGACAACACTAACAAGTGCAAACCACATGAATTATCTTTGTCAGATCGATTTTCCGATCTTACCAATGACTCTTCTTTGTTAATCCAAGCCATGGAGCTTTCTGGTCCAAGGTGA | 1926 | 0.3972 | MEISRGEGFLCFVTLFLFLCSTNALLSPKGINFEVQALMSIKASLMDPHGILENWDASLMDPHGILENWDGDAVDPCSWNMVTCSTENLVISLGIPSQNLSGTLSPSIGKLTNLQTIMLQNNNITGPISSELGKLSMLQTLDLSDNFFNGKIPTSLGHLRKLQYLRLNNNSFSGECPESLANMAQLTFLDLSFNNLSGSVPRILAKSFSIVGNPLVCATAKETNCHGMKLMPMSMNLNNTNDALPSRRTKAHKRVIAFGLSLGCLCLLVLVLGFGFLLWRRHKHNQQTFFDVKDRHHEEVYLGNLKRFQLRELQIATHNFSNKNILGKGGFGIVYKGILSDGTLVAVKRLKDGNAKGGEIQFQTEVEMISLAVHRNLLKLYGFCMTSSERLLVYPYMSNGSVASRLKAKPVLDWGTRKQIALGAGRGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHKDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGLRALEFGKAANQKGAMLDWVKKIHQEKKLDLLVDKDLKNNYDKIELEEIVQVALLCTQYLPSHRPKMSEVVRMLEGDGLAEKWEASQRADNTNKCKPHELSLSDRFSDLTNDSSLLIQAMELSGPR* | 642 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa1g1452 | 641 | Gene3D | Phosphorylase Kinase; domain 1 | 289 | 396 | - | - | |
Psa1g1452 | 641 | SUPERFAMILY | L domain-like | 52 | 210 | - | - | |
Psa1g1452 | 641 | SMART | serkin_6 | 320 | 589 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa1g1452 | 641 | Gene3D | Transferase(Phosphotransferase) domain 1 | 397 | 609 | - | - | |
Psa1g1452 | 641 | ProSiteProfiles | Protein kinase domain profile. | 320 | 599 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa1g1452 | 641 | Pfam | Leucine rich repeat N-terminal domain | 57 | 85 | IPR013210 | - | |
Psa1g1452 | 641 | Pfam | Leucine rich repeat N-terminal domain | 34 | 56 | IPR013210 | - | |
Psa1g1452 | 641 | ProSitePatterns | Protein kinases ATP-binding region signature. | 326 | 348 | IPR017441 | GO:0005524 | |
Psa1g1452 | 641 | PANTHER | PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 | 5 | 57 | - | - | |
Psa1g1452 | 641 | PANTHER | PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 | 57 | 641 | - | - | |
Psa1g1452 | 641 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 5 | 57 | - | - | |
Psa1g1452 | 641 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 57 | 641 | - | - | |
Psa1g1452 | 641 | SMART | LRR_typ_2 | 111 | 135 | IPR003591 | - | |
Psa1g1452 | 641 | SMART | LRR_typ_2 | 183 | 206 | IPR003591 | - | |
Psa1g1452 | 641 | SMART | LRR_typ_2 | 159 | 182 | IPR003591 | - | |
Psa1g1452 | 641 | Pfam | Leucine rich repeat | 138 | 196 | IPR001611 | GO:0005515 | |
Psa1g1452 | 641 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 439 | 451 | IPR008271 | GO:0004672|GO:0006468 | |
Psa1g1452 | 641 | SUPERFAMILY | Protein kinase-like (PK-like) | 297 | 590 | IPR011009 | - | |
Psa1g1452 | 641 | Pfam | Protein kinase domain | 321 | 587 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Psa1g1452 | 641 | Gene3D | Ribonuclease Inhibitor | 31 | 227 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa1g1452 | Psa-Chr1 | 98663210 | 98667577 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa1g1452 | 1 | 641 | Receptor kinase-like Gene Family | AT5G16000 | 72.994 | 0.0 | 953 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-II | Psa1g1452 | Pkinase | 3.4e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa1g1452 | - | - | gmx:100806650 | 1037.33 |