Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa1g1411 TACTGTACAATCATTGATGCTCATGGACATCGTGATTTTATTAAGAACATAATTACGGGTACCTCCCAGTCTAATTGTGTCGTCCTTATCATTGATTCCACCACTAGTGGTTTTGAGGTTGTTATCTCCAAGGATGGACAAACTCATGAGCATGCTCTTTTTGCTTTTACTCTTGGAGTGAAGCAGGGACCAACTCTTCTTGATTCTATTGACAACATCAATGATCCCAAGAGACCCTCAGACAAGCCCTCAAGGCTTCAATTGCAAGATGTTTACAAGATTGGTGGTATTAGAACTATGTCAATGGGACGTGTTGAAACTGGTATTGTGAAGCCCGATATGATTGTGACTTTTTCTCTAGTGGTTTGGAAACTAAGGTTAAGTCTATTTAGATGCACCACGGGATGCTCACTGAAGCTCTACCAGGAGAGAATGTCAGATTCAATGCTAAGAATGTTACAATCAAGGATCTCAAGAGAATGCAAATAG 489 0.4029 YCTIIDAHGHRDFIKNIITGTSQSNCVVLIIDSTTSGFEVVISKDGQTHEHALFAFTLGVKQGPTLLDSIDNINDPKRPSDKPSRLQLQDVYKIGGIRTMSMGRVETGIVKPDMIVTFSLVVWKLRLSLFRCTTGCSLKLYQERMSDSMLRMLQSRISRECK* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa1g1411 162 Pfam Elongation factor Tu GTP binding domain 2 63 IPR000795 GO:0003924|GO:0005525
Psa1g1411 162 PANTHER ELONGATION FACTOR 1-ALPHA 1 62 - -
Psa1g1411 162 PANTHER ELONGATION FACTOR 1-ALPHA 62 119 - -
Psa1g1411 162 Gene3D Translation factors 85 125 - -
Psa1g1411 162 PANTHER TRANSLATION FACTOR 1 62 - -
Psa1g1411 162 PANTHER TRANSLATION FACTOR 62 119 - -
Psa1g1411 162 Gene3D - 1 84 IPR027417 -
Psa1g1411 162 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 96 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa1g1411 Psa-Chr1 95706143 95706823 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa1g1411 1 62 Eukaryotic Initiation Factors Gene Family AT1G07930 82.258 3.62e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa1g1411 K03231 - fve:101310772 142.51